PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
MCI28934.1[Trifolium Alkaloid NMT medium pass
MCI29616.1[Trifolium Alkaloid NMT medium pass
MCI31145.1[Trifolium Alkaloid NMT medium pass
MCI33332.1[Trifolium Alkaloid NMT medium pass
MCI33516.1[Trifolium Alkaloid NMT medium pass
MCI34374.1[Trifolium Alkaloid NMT medium pass
MCI34610.1[Trifolium Alkaloid NMT medium pass
MCI34845.1[Trifolium Alkaloid NMT medium pass
MCI34887.1[Trifolium Alkaloid NMT medium pass
MCI37168.1[Trifolium Alkaloid NMT medium pass
MCI38920.1[Trifolium Alkaloid NMT medium pass
MCI39307.1[Trifolium Alkaloid NMT medium pass
MCI40507.1[Trifolium Alkaloid NMT medium pass
MCI50181.1[Trifolium Alkaloid NMT medium pass
MCI53040.1[Trifolium Alkaloid NMT medium pass
MCI56231.1[Trifolium Alkaloid NMT medium pass
MCI79677.1[Trifolium Alkaloid NMT medium pass
MCI88008.1[Trifolium Alkaloid NMT medium pass
MCI95424.1[Trifolium Alkaloid NMT medium pass
MCH87718.1[Trifolium Alkaloid ODC medium pass
MCI35830.1[Trifolium Alkaloid ODC medium pass
MCI67834.1[Trifolium Alkaloid ODC medium pass
MCH89144.1[Trifolium Alkaloid PMT medium pass
MCH94301.1[Trifolium Alkaloid PMT low borderline
MCH99412.1[Trifolium Alkaloid PMT medium borderline
MCI05638.1[Trifolium Alkaloid PMT low borderline
MCI11103.1[Trifolium Alkaloid PMT medium borderline
MCI17491.1[Trifolium Alkaloid PMT medium pass
MCI19109.1[Trifolium Alkaloid PMT low borderline
MCI21671.1[Trifolium Alkaloid PMT medium pass
MCH79445.1[Trifolium Alkaloid PYKS high pass
MCH79604.1[Trifolium Alkaloid PYKS medium pass
MCH80020.1[Trifolium Alkaloid PYKS low borderline
MCH80021.1[Trifolium Alkaloid PYKS high pass
MCH80036.1[Trifolium Alkaloid PYKS medium pass
MCH80482.1[Trifolium Alkaloid PYKS medium pass
MCH80911.1[Trifolium Alkaloid PYKS medium pass
MCH81017.1[Trifolium Alkaloid PYKS low borderline
MCH81479.1[Trifolium Alkaloid PYKS medium pass
MCH85108.1[Trifolium Alkaloid PYKS high pass
MCH85113.1[Trifolium Alkaloid PYKS low borderline
MCH85343.1[Trifolium Alkaloid PYKS low borderline
MCH85479.1[Trifolium Alkaloid PYKS low borderline
MCH85620.1[Trifolium Alkaloid PYKS medium pass
MCH85658.1[Trifolium Alkaloid PYKS low borderline
MCH87501.1[Trifolium Alkaloid PYKS high pass
MCH89602.1[Trifolium Alkaloid PYKS medium pass
MCH92293.1[Trifolium Alkaloid PYKS low borderline
MCH93080.1[Trifolium Alkaloid PYKS medium pass
MCH96652.1[Trifolium Alkaloid PYKS medium pass