PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
MCH81685.1[Trifolium Terpenoid AACT medium borderline
MCH88919.1[Trifolium Terpenoid AACT medium borderline
MCH92614.1[Trifolium Terpenoid AACT medium borderline
MCH93786.1[Trifolium Terpenoid AACT medium borderline
MCI02521.1[Trifolium Terpenoid AACT medium pass
MCI27322.1[Trifolium Terpenoid AACT medium pass
MCI31384.1[Trifolium Terpenoid AACT medium pass
MCI68032.1[Trifolium Terpenoid AACT medium pass
MCI75674.1[Trifolium Terpenoid AACT low borderline
MCI77236.1[Trifolium Terpenoid AACT low borderline
MCH79754.1[Trifolium Terpenoid BAHD medium pass
MCH79955.1[Trifolium Terpenoid BAHD low borderline
MCH80423.1[Trifolium Terpenoid BAHD medium pass
MCH81458.1[Trifolium Terpenoid BAHD medium pass
MCH82035.1[Trifolium Terpenoid BAHD medium pass
MCH82809.1[Trifolium Terpenoid BAHD medium pass
MCH82957.1[Trifolium Terpenoid BAHD medium pass
MCH83319.1[Trifolium Terpenoid BAHD medium pass
MCH83463.1[Trifolium Terpenoid BAHD medium pass
MCH83651.1[Trifolium Terpenoid BAHD medium pass
MCH84370.1[Trifolium Terpenoid BAHD medium pass
MCH84413.1[Trifolium Terpenoid BAHD medium pass
MCH84646.1[Trifolium Terpenoid BAHD medium pass
MCH85485.1[Trifolium Terpenoid BAHD medium pass
MCH85600.1[Trifolium Terpenoid BAHD medium pass
MCH86267.1[Trifolium Terpenoid BAHD low borderline
MCH86683.1[Trifolium Terpenoid BAHD medium pass
MCH87063.1[Trifolium Terpenoid BAHD medium pass
MCH87231.1[Trifolium Terpenoid BAHD medium pass
MCH87268.1[Trifolium Terpenoid BAHD medium pass
MCH87597.1[Trifolium Terpenoid BAHD medium pass
MCH87907.1[Trifolium Terpenoid BAHD medium pass
MCH88166.1[Trifolium Terpenoid BAHD medium pass
MCH88209.1[Trifolium Terpenoid BAHD medium pass
MCH88396.1[Trifolium Terpenoid BAHD medium pass
MCH88642.1[Trifolium Terpenoid BAHD medium pass
MCH89144.1[Trifolium Terpenoid BAHD low borderline
MCH89525.1[Trifolium Terpenoid BAHD medium pass
MCH89578.1[Trifolium Terpenoid BAHD medium pass
MCH90005.1[Trifolium Terpenoid BAHD medium pass
MCH90037.1[Trifolium Terpenoid BAHD medium pass
MCH90210.1[Trifolium Terpenoid BAHD medium pass
MCH90283.1[Trifolium Terpenoid BAHD medium pass
MCH90723.1[Trifolium Terpenoid BAHD medium pass
MCH90869.1[Trifolium Terpenoid BAHD medium pass
MCH91137.1[Trifolium Terpenoid BAHD medium pass
MCH91260.1[Trifolium Terpenoid BAHD medium pass
MCH91366.1[Trifolium Terpenoid BAHD medium pass
MCH91706.1[Trifolium Terpenoid BAHD medium pass
MCH92014.1[Trifolium Terpenoid BAHD low borderline