PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
MCH81831.1[Trifolium Alkaloid T3O low borderline
MCH81927.1[Trifolium Alkaloid T3O medium borderline
MCH84897.1[Trifolium Alkaloid T3O medium pass
MCH85733.1[Trifolium Alkaloid T3O medium borderline
MCH90602.1[Trifolium Alkaloid T3O medium borderline
MCH90827.1[Trifolium Alkaloid T3O medium pass
MCH91510.1[Trifolium Alkaloid T3O medium borderline
MCH93475.1[Trifolium Alkaloid T3O low borderline
MCH96344.1[Trifolium Alkaloid T3O low borderline
MCH97986.1[Trifolium Alkaloid T3O medium borderline
MCH98798.1[Trifolium Alkaloid T3O medium borderline
MCH99182.1[Trifolium Alkaloid T3O medium borderline
MCH99982.1[Trifolium Alkaloid T3O low borderline
MCI00328.1[Trifolium Alkaloid T3O medium borderline
MCI00341.1[Trifolium Alkaloid T3O medium borderline
MCI01678.1[Trifolium Alkaloid T3O medium borderline
MCI01834.1[Trifolium Alkaloid T3O medium borderline
MCI05476.1[Trifolium Alkaloid T3O medium borderline
MCI06043.1[Trifolium Alkaloid T3O medium borderline
MCI06203.1[Trifolium Alkaloid T3O medium pass
MCI06404.1[Trifolium Alkaloid T3O medium borderline
MCI06797.1[Trifolium Alkaloid T3O low borderline
MCI08966.1[Trifolium Alkaloid T3O low borderline
MCI10625.1[Trifolium Alkaloid T3O medium borderline
MCI10924.1[Trifolium Alkaloid T3O medium borderline
MCI11026.1[Trifolium Alkaloid T3O medium borderline
MCI12734.1[Trifolium Alkaloid T3O medium pass
MCI14175.1[Trifolium Alkaloid T3O low borderline
MCI14679.1[Trifolium Alkaloid T3O medium borderline
MCI16849.1[Trifolium Alkaloid T3O medium borderline
MCI18089.1[Trifolium Alkaloid T3O low borderline
MCI18498.1[Trifolium Alkaloid T3O medium pass
MCI19301.1[Trifolium Alkaloid T3O low borderline
MCI19302.1[Trifolium Alkaloid T3O medium borderline
MCI22029.1[Trifolium Alkaloid T3O low borderline
MCI22212.1[Trifolium Alkaloid T3O medium pass
MCI23723.1[Trifolium Alkaloid T3O medium borderline
MCI24933.1[Trifolium Alkaloid T3O medium borderline
MCI26174.1[Trifolium Alkaloid T3O medium borderline
MCI26199.1[Trifolium Alkaloid T3O medium pass
MCI26700.1[Trifolium Alkaloid T3O medium borderline
MCI28928.1[Trifolium Alkaloid T3O medium borderline
MCI29357.1[Trifolium Alkaloid T3O medium borderline
MCI29677.1[Trifolium Alkaloid T3O medium borderline
MCI29991.1[Trifolium Alkaloid T3O low borderline
MCI34127.1[Trifolium Alkaloid T3O medium borderline
MCI42080.1[Trifolium Alkaloid T3O medium pass
MCI46382.1[Trifolium Alkaloid T3O medium borderline
MCI47105.1[Trifolium Alkaloid T3O medium borderline
MCI53444.1[Trifolium Alkaloid T3O medium borderline