PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
MCH79658.1[Trifolium Phenylpropanoid COMT medium pass
MCH81197.1[Trifolium Phenylpropanoid COMT medium pass
MCH81599.1[Trifolium Phenylpropanoid COMT low borderline
MCH85043.1[Trifolium Phenylpropanoid COMT medium pass
MCH93942.1[Trifolium Phenylpropanoid COMT medium pass
MCH97114.1[Trifolium Phenylpropanoid COMT medium pass
MCH99689.1[Trifolium Phenylpropanoid COMT medium pass
MCI00313.1[Trifolium Phenylpropanoid COMT low borderline
MCI00539.1[Trifolium Phenylpropanoid COMT medium pass
MCI00662.1[Trifolium Phenylpropanoid COMT medium pass
MCI07631.1[Trifolium Phenylpropanoid COMT medium pass
MCI07788.1[Trifolium Phenylpropanoid COMT medium pass
MCI08226.1[Trifolium Phenylpropanoid COMT medium pass
MCI08783.1[Trifolium Phenylpropanoid COMT medium pass
MCI08963.1[Trifolium Phenylpropanoid COMT medium pass
MCI08968.1[Trifolium Phenylpropanoid COMT medium pass
MCI12799.1[Trifolium Phenylpropanoid COMT low borderline
MCI13896.1[Trifolium Phenylpropanoid COMT medium pass
MCI17611.1[Trifolium Phenylpropanoid COMT medium pass
MCI18344.1[Trifolium Phenylpropanoid COMT medium pass
MCI18794.1[Trifolium Phenylpropanoid COMT medium pass
MCI19638.1[Trifolium Phenylpropanoid COMT low borderline
MCI19890.1[Trifolium Phenylpropanoid COMT medium pass
MCI19960.1[Trifolium Phenylpropanoid COMT medium pass
MCI20107.1[Trifolium Phenylpropanoid COMT medium pass
MCI28401.1[Trifolium Phenylpropanoid COMT medium pass
MCI30785.1[Trifolium Phenylpropanoid COMT medium pass
MCI31145.1[Trifolium Phenylpropanoid COMT medium pass
MCI38920.1[Trifolium Phenylpropanoid COMT medium pass
MCI57777.1[Trifolium Phenylpropanoid COMT low borderline
MCI66041.1[Trifolium Phenylpropanoid COMT medium pass
MCI77793.1[Trifolium Phenylpropanoid COMT medium pass