PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status Best Target
MCH81906.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCH81959.1[Trifolium Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
MCH82175.1[Trifolium Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
MCH84152.1[Trifolium Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
MCH85988.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
MCH87514.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCH87687.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
MCH88728.1[Trifolium Rosmarinic Acid 4CL low borderline 4CL__00008__sp_Q42982_4CL2_ORYSJ
MCH89345.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
MCH90411.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCH91035.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCH91919.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
MCH91926.1[Trifolium Rosmarinic Acid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
MCH95925.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCH96271.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
MCH98374.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
MCH98598.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
MCI00872.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
MCI04264.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
MCI04672.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
MCI05256.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
MCI06882.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCI09949.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
MCI10307.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
MCI10648.1[Trifolium Rosmarinic Acid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
MCI11686.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
MCI12327.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
MCI12963.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
MCI13790.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
MCI14146.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
MCI15002.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
MCI15456.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
MCI16334.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
MCI18823.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
MCI19950.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
MCI19959.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
MCI20851.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
MCI21083.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
MCI21179.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
MCI22365.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCI23746.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
MCI24369.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
MCI28224.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
MCI31439.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCI31909.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCI32068.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
MCI35137.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
MCI35187.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
MCI37186.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
MCI38603.1[Trifolium Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH