PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status
MCH79542.1[Trifolium Terpenoid UGT medium pass
MCH79543.1[Trifolium Terpenoid UGT medium pass
MCH80229.1[Trifolium Terpenoid UGT medium pass
MCH80351.1[Trifolium Terpenoid UGT medium pass
MCH81192.1[Trifolium Terpenoid UGT medium pass
MCH82346.1[Trifolium Terpenoid UGT medium pass
MCH83203.1[Trifolium Terpenoid UGT medium pass
MCH83658.1[Trifolium Terpenoid UGT low borderline
MCH84404.1[Trifolium Terpenoid UGT medium pass
MCH84608.1[Trifolium Terpenoid UGT medium pass
MCH84679.1[Trifolium Terpenoid UGT medium pass
MCH85094.1[Trifolium Terpenoid UGT medium pass
MCH85886.1[Trifolium Terpenoid UGT medium pass
MCH86360.1[Trifolium Terpenoid UGT low borderline
MCH86595.1[Trifolium Terpenoid UGT medium pass
MCH87849.1[Trifolium Terpenoid UGT medium pass
MCH89973.1[Trifolium Terpenoid UGT medium pass
MCH90318.1[Trifolium Terpenoid UGT medium pass
MCH90506.1[Trifolium Terpenoid UGT medium pass
MCH90714.1[Trifolium Terpenoid UGT medium pass
MCH91358.1[Trifolium Terpenoid UGT medium pass
MCH91722.1[Trifolium Terpenoid UGT medium pass
MCH92065.1[Trifolium Terpenoid UGT medium pass
MCH92151.1[Trifolium Terpenoid UGT medium pass
MCH92554.1[Trifolium Terpenoid UGT medium pass
MCH93585.1[Trifolium Terpenoid UGT medium pass
MCH93586.1[Trifolium Terpenoid UGT medium pass
MCH94055.1[Trifolium Terpenoid UGT medium pass
MCH94057.1[Trifolium Terpenoid UGT medium pass
MCH94264.1[Trifolium Terpenoid UGT medium pass
MCH95689.1[Trifolium Terpenoid UGT medium pass
MCH96837.1[Trifolium Terpenoid UGT medium pass
MCH97279.1[Trifolium Terpenoid UGT medium pass
MCH97495.1[Trifolium Terpenoid UGT medium pass
MCH98312.1[Trifolium Terpenoid UGT medium pass
MCH98380.1[Trifolium Terpenoid UGT medium pass
MCH98709.1[Trifolium Terpenoid UGT medium pass
MCH99185.1[Trifolium Terpenoid UGT medium pass
MCH99324.1[Trifolium Terpenoid UGT medium pass
MCH99369.1[Trifolium Terpenoid UGT medium pass
MCH99550.1[Trifolium Terpenoid UGT medium pass
MCH99595.1[Trifolium Terpenoid UGT medium pass
MCH99644.1[Trifolium Terpenoid UGT medium pass
MCI00055.1[Trifolium Terpenoid UGT medium pass
MCI00653.1[Trifolium Terpenoid UGT medium pass
MCI00796.1[Trifolium Terpenoid UGT low borderline
MCI01140.1[Trifolium Terpenoid UGT medium pass
MCI01299.1[Trifolium Terpenoid UGT medium pass
MCI01445.1[Trifolium Terpenoid UGT low borderline
MCI02155.1[Trifolium Terpenoid UGT medium pass