PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
MCH84617.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCH87066.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCH90744.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCH91394.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCH94345.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCH96344.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCH97726.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI00341.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI00394.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI03645.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI06043.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI06404.1[Trifolium Steroid BR6OX2/CYP85A2 medium borderline
MCI07783.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI08966.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI09194.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI10625.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI11026.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI14175.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI14453.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI14679.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI15960.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI16152.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI16849.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI16927.1[Trifolium Steroid BR6OX2/CYP85A2 medium borderline
MCI18498.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI23005.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI23209.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI23871.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI24634.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI24933.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI26174.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI26700.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI27549.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI27590.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI29357.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI30787.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI31313.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI46382.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI47105.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI53444.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI57189.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI69400.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI72952.1[Trifolium Steroid BR6OX2/CYP85A2 medium borderline
MCI73280.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI73595.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline