PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
MCI27847.1[Trifolium Phenylpropanoid PAL medium pass
MCI27884.1[Trifolium Phenylpropanoid PAL medium pass
MCI28210.1[Trifolium Phenylpropanoid PAL medium pass
MCI32105.1[Trifolium Phenylpropanoid PAL low borderline
MCI41785.1[Trifolium Phenylpropanoid PAL medium pass
MCI43780.1[Trifolium Phenylpropanoid PAL medium pass
MCI58134.1[Trifolium Phenylpropanoid PAL medium pass
MCI69811.1[Trifolium Phenylpropanoid PAL medium pass
MCI87125.1[Trifolium Phenylpropanoid PAL medium pass
MCI88840.1[Trifolium Phenylpropanoid PAL medium pass
MCH79920.1[Trifolium Phenylpropanoid POD low borderline
MCH80070.1[Trifolium Phenylpropanoid POD medium pass
MCH81474.1[Trifolium Phenylpropanoid POD medium pass
MCH81593.1[Trifolium Phenylpropanoid POD medium pass
MCH81902.1[Trifolium Phenylpropanoid POD medium pass
MCH82191.1[Trifolium Phenylpropanoid POD medium pass
MCH82321.1[Trifolium Phenylpropanoid POD medium pass
MCH83114.1[Trifolium Phenylpropanoid POD medium pass
MCH83417.1[Trifolium Phenylpropanoid POD medium pass
MCH84053.1[Trifolium Phenylpropanoid POD medium pass
MCH84258.1[Trifolium Phenylpropanoid POD medium pass
MCH84278.1[Trifolium Phenylpropanoid POD medium pass
MCH85379.1[Trifolium Phenylpropanoid POD medium pass
MCH85756.1[Trifolium Phenylpropanoid POD medium pass
MCH85967.1[Trifolium Phenylpropanoid POD medium pass
MCH86544.1[Trifolium Phenylpropanoid POD medium pass
MCH86579.1[Trifolium Phenylpropanoid POD medium pass
MCH86586.1[Trifolium Phenylpropanoid POD medium pass
MCH87104.1[Trifolium Phenylpropanoid POD medium pass
MCH87399.1[Trifolium Phenylpropanoid POD medium pass
MCH88071.1[Trifolium Phenylpropanoid POD medium pass
MCH88236.1[Trifolium Phenylpropanoid POD medium pass
MCH88478.1[Trifolium Phenylpropanoid POD medium pass
MCH88544.1[Trifolium Phenylpropanoid POD medium pass
MCH88562.1[Trifolium Phenylpropanoid POD medium pass
MCH88975.1[Trifolium Phenylpropanoid POD medium pass
MCH89114.1[Trifolium Phenylpropanoid POD medium pass
MCH89273.1[Trifolium Phenylpropanoid POD medium pass
MCH89949.1[Trifolium Phenylpropanoid POD medium pass
MCH90122.1[Trifolium Phenylpropanoid POD medium pass
MCH90158.1[Trifolium Phenylpropanoid POD medium pass
MCH90695.1[Trifolium Phenylpropanoid POD medium pass
MCH91858.1[Trifolium Phenylpropanoid POD medium pass
MCH91860.1[Trifolium Phenylpropanoid POD low borderline
MCH92598.1[Trifolium Phenylpropanoid POD medium pass
MCH92891.1[Trifolium Phenylpropanoid POD medium pass
MCH93078.1[Trifolium Phenylpropanoid POD medium pass
MCH94033.1[Trifolium Phenylpropanoid POD medium pass
MCH95272.1[Trifolium Phenylpropanoid POD medium pass
MCH95834.1[Trifolium Phenylpropanoid POD medium pass