PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
MCI19302.1[Trifolium Terpenoid CYP76 medium borderline
MCI19757.1[Trifolium Terpenoid CYP76 medium pass
MCI20688.1[Trifolium Terpenoid CYP76 medium pass
MCI21414.1[Trifolium Terpenoid CYP76 medium pass
MCI23005.1[Trifolium Terpenoid CYP76 medium borderline
MCI23209.1[Trifolium Terpenoid CYP76 medium borderline
MCI23723.1[Trifolium Terpenoid CYP76 medium borderline
MCI23871.1[Trifolium Terpenoid CYP76 medium borderline
MCI24403.1[Trifolium Terpenoid CYP76 medium pass
MCI24448.1[Trifolium Terpenoid CYP76 medium pass
MCI25155.1[Trifolium Terpenoid CYP76 medium pass
MCI25835.1[Trifolium Terpenoid CYP76 medium pass
MCI26174.1[Trifolium Terpenoid CYP76 medium borderline
MCI27820.1[Trifolium Terpenoid CYP76 medium pass
MCI29677.1[Trifolium Terpenoid CYP76 medium borderline
MCI30067.1[Trifolium Terpenoid CYP76 medium pass
MCI30171.1[Trifolium Terpenoid CYP76 medium borderline
MCI30787.1[Trifolium Terpenoid CYP76 medium pass
MCI31313.1[Trifolium Terpenoid CYP76 medium borderline
MCI33019.1[Trifolium Terpenoid CYP76 medium pass
MCI34127.1[Trifolium Terpenoid CYP76 medium borderline
MCI36247.1[Trifolium Terpenoid CYP76 medium borderline
MCI36636.1[Trifolium Terpenoid CYP76 medium pass
MCI36764.1[Trifolium Terpenoid CYP76 medium borderline
MCI41438.1[Trifolium Terpenoid CYP76 low borderline
MCI46382.1[Trifolium Terpenoid CYP76 medium borderline
MCI46730.1[Trifolium Terpenoid CYP76 medium pass
MCI53444.1[Trifolium Terpenoid CYP76 medium borderline
MCI54707.1[Trifolium Terpenoid CYP76 medium pass
MCI55851.1[Trifolium Terpenoid CYP76 medium pass
MCI57189.1[Trifolium Terpenoid CYP76 medium borderline
MCI57660.1[Trifolium Terpenoid CYP76 low borderline
MCI58185.1[Trifolium Terpenoid CYP76 medium pass
MCI58701.1[Trifolium Terpenoid CYP76 medium borderline
MCI65251.1[Trifolium Terpenoid CYP76 medium pass
MCI67740.1[Trifolium Terpenoid CYP76 medium pass
MCI67935.1[Trifolium Terpenoid CYP76 medium pass
MCI69400.1[Trifolium Terpenoid CYP76 medium borderline
MCI73280.1[Trifolium Terpenoid CYP76 medium borderline
MCI73595.1[Trifolium Terpenoid CYP76 medium pass
MCI76673.1[Trifolium Terpenoid CYP76 medium pass
MCI88312.1[Trifolium Terpenoid CYP76 medium borderline
MCI97498.1[Trifolium Terpenoid CYP76 medium pass
MCH95333.1[Trifolium Terpenoid DXR medium pass
MCH98341.1[Trifolium Terpenoid DXR medium pass
MCH98754.1[Trifolium Terpenoid DXR low borderline
MCI07559.1[Trifolium Terpenoid DXR low borderline
MCI10337.1[Trifolium Terpenoid DXR medium pass
MCI16059.1[Trifolium Terpenoid DXR medium pass
MCI17731.1[Trifolium Terpenoid DXR medium pass