Bombax ceiba (bombax_ceiba)
Imported from atlas release summary for Bombax ceiba.
2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
6334
Family-Level Calls
C4H
6.66%
C3'H/CYP98A
6.06%
BAHD
5.35%
UGT
4.12%
CYP76
3.96%
IFS
3.8%
7DLGT
3.43%
F3H
3.41%
Other Families
63.2%
More Families (96)
T3O
210
3.32%
UFGT
209
3.3%
POD
208
3.28%
4CL
195
3.08%
DWF4/CYP90B1
170
2.68%
NMT
142
2.24%
CODM/T6ODM
131
2.07%
BR6OX2/CYP85A2
122
1.93%
F3'H/CYP75B
111
1.75%
STR
104
1.64%
H6H
100
1.58%
CAD
96
1.52%
LAC
84
1.33%
CYP71
83
1.31%
CAS
80
1.26%
TPS
77
1.22%
HCT
70
1.11%
SMT1/SMT2/SMT3
70
1.11%
GES
67
1.06%
CSE
66
1.04%
TRI/TRII
65
1.03%
BBE
65
1.03%
T16H
62
0.98%
CYP90D1
59
0.93%
F3'5'H/CYP75A
56
0.88%
G8O/G8H
54
0.85%
COMT
54
0.85%
RAS
50
0.79%
IO
49
0.77%
PYKS
48
0.76%
IFR
48
0.76%
PAL
48
0.76%
7DLH
45
0.71%
GS
44
0.69%
FNS
42
0.66%
F5H/CYP84A
38
0.6%
TAT
35
0.55%
PMT
34
0.54%
NCS
34
0.54%
ANR
34
0.54%
CPD/CYP90A1
34
0.54%
16OMT
32
0.51%
CCR
32
0.51%
ANS/LDOX
30
0.47%
LAMT
28
0.44%
SLS
24
0.38%
SGD
24
0.38%
BR6OX1/CYP85A1
24
0.38%
COR
23
0.36%
GGPPS
23
0.36%
SQE
22
0.35%
DFR
19
0.3%
CYP719
18
0.28%
CCoAOMT
18
0.28%
CYP51G1
17
0.27%
FPPS
17
0.27%
8HGO
16
0.25%
CHS
16
0.25%
CYP80B1
15
0.24%
MPO
13
0.21%
TYDC_DDC
12
0.19%
CPR
12
0.19%
CNMT
11
0.17%
HPPR
11
0.17%
ROT3/CYP90C1
11
0.17%
AACT
11
0.17%
ODC
9
0.14%
SMO1/SMO2
9
0.14%
HMGR
9
0.14%
TDC
8
0.13%
SQS/FDFT1
8
0.13%
CHI
7
0.11%
DXS
7
0.11%
ADC
6
0.09%
HDR/IspH
6
0.09%
ISY
5
0.08%
MVK
5
0.08%
MVD
5
0.08%
HMGS
5
0.08%
DET2
4
0.06%
DWF7
4
0.06%
HDS/IspG
4
0.06%
IDI
4
0.06%
MDS/IspF
4
0.06%
FK
3
0.05%
MCT/IspD
3
0.05%
DXR
3
0.05%
PMK
3
0.05%
DWF1
2
0.03%
GPPS
2
0.03%
XMT_MXMT_DXMT
1
0.02%
FLS
1
0.02%
HYD1
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 774 | 21 | BAHD (273) | View species results |
| Phenylpropanoid pathway | 551 | 11 | POD (204) | View species results |
| Alkaloid pathway | 541 | 24 | 7DLGT (105) | View species results |
| Flavonoid pathway | 313 | 13 | UFGT (186) | View species results |
| Rosmarinic acid pathway | 212 | 7 | C4H (83) | View species results |
| Steroid pathway | 158 | 12 | CAS (71) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2500 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 459 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| BceiScaffold790493040 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| BceiScaffold80503250 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| BceiScaffold80503260 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| BceiScaffold1030010800 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| BceiScaffold2620249640 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| BceiScaffold2620249650 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| BceiScaffold26710255930 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| BceiScaffold27130257860 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| BceiScaffold27130257900 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| BceiScaffold2730258760 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00003__sp_P17770_TDC_CATRO |
| BceiScaffold2820261830 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| BceiScaffold30276640 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH |
| BceiScaffold4170357110 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| BceiScaffold650452820 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| BceiScaffold7420483540 | Alkaloid | TYDC_DDC | medium | borderline | TYDC_DDC__00002__sp_O82415_TYDC_PAPSO |
| BceiScaffold4540373110 | Alkaloid | XMT_MXMT_DXMT | medium | borderline | XMT_MXMT_DXMT__00001__sp_A0A0S2PM82_TCS3_CAMSI |
| BceiScaffold100007120 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| BceiScaffold10004190 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold1030010020 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| BceiScaffold1090029250 | Flavonoid | 4CL | low | borderline | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| BceiScaffold110037690 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| BceiScaffold1250060110 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| BceiScaffold1380082550 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| BceiScaffold1410089870 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold1420091050 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| BceiScaffold1450099740 | Flavonoid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| BceiScaffold1470100780 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| BceiScaffold1700132860 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold1960158770 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold210172510 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold210172540 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold2120176020 | Flavonoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| BceiScaffold2200184120 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| BceiScaffold2210187680 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold2260198120 | Flavonoid | 4CL | medium | pass | 4CL__00007__sp_Q42524_4CL1_ARATH |
| BceiScaffold2300205690 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| BceiScaffold2310207770 | Flavonoid | 4CL | medium | pass | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| BceiScaffold2430216330 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold2460220130 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| BceiScaffold2460220160 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold2470221460 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| BceiScaffold250225200 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| BceiScaffold2710257600 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold2710257620 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold2710257630 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| BceiScaffold2910270270 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| BceiScaffold2910270280 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| BceiScaffold30280350 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| BceiScaffold30280360 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| BceiScaffold3240296340 | Flavonoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |