PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

5817
Candidate Protein Records
4681
Pathway-Level Records
11555
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Protein/Isoform Record Pathway Family Confidence Status
XP_010413227.1 Flavonoid IFR low borderline
XP_010413228.1 Flavonoid IFR low borderline
XP_010413229.1 Flavonoid IFR low borderline
XP_010415893.1 Flavonoid IFR low borderline
XP_010416398.1 Flavonoid IFR high pass
XP_010416399.1 Flavonoid IFR high pass
XP_010416400.1 Flavonoid IFR high pass
XP_010416402.1 Flavonoid IFR high pass
XP_010416405.1 Flavonoid IFR high pass
XP_010419602.1 Flavonoid IFR low borderline
XP_010420270.1 Flavonoid IFR low borderline
XP_010420273.1 Flavonoid IFR low borderline
XP_010420646.1 Flavonoid IFR medium pass
XP_010421918.1 Flavonoid IFR low borderline
XP_010422816.1 Flavonoid IFR low borderline
XP_010423884.1 Flavonoid IFR low borderline
XP_010424093.1 Flavonoid IFR low borderline
XP_010424208.1 Flavonoid IFR low borderline
XP_010427004.1 Flavonoid IFR low borderline
XP_010427206.1 Flavonoid IFR low borderline
XP_010427295.1 Flavonoid IFR low borderline
XP_010427299.2 Flavonoid IFR low borderline
XP_010428539.1 Flavonoid IFR high pass
XP_010428540.1 Flavonoid IFR high pass
XP_010428541.1 Flavonoid IFR high pass
XP_010428542.1 Flavonoid IFR high pass
XP_010428543.1 Flavonoid IFR high pass
XP_010428544.1 Flavonoid IFR high pass
XP_010428545.1 Flavonoid IFR high pass
XP_010432309.1 Flavonoid IFR medium pass
XP_010432402.1 Flavonoid IFR high pass
XP_010432852.1 Flavonoid IFR low borderline
XP_010432987.1 Flavonoid IFR low borderline
XP_010433840.1 Flavonoid IFR low borderline
XP_010434492.1 Flavonoid IFR low borderline
XP_010435236.1 Flavonoid IFR high pass
XP_010437038.1 Flavonoid IFR high pass
XP_010437500.1 Flavonoid IFR medium pass
XP_010437600.1 Flavonoid IFR high pass
XP_010437678.1 Flavonoid IFR low borderline
XP_010438027.2 Flavonoid IFR low borderline
XP_010438178.1 Flavonoid IFR low borderline
XP_010439113.1 Flavonoid IFR low borderline
XP_010439808.1 Flavonoid IFR low borderline
XP_010439809.1 Flavonoid IFR low borderline
XP_010440550.1 Flavonoid IFR high pass
XP_010440553.1 Flavonoid IFR high pass
XP_010440554.1 Flavonoid IFR high pass
XP_010441060.1 Flavonoid IFR low borderline
XP_010446459.1 Flavonoid IFR high pass