PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
XP_019093712.1 Alkaloid 16OMT medium borderline
XP_010517372.1 Alkaloid 6OMT_4OMT_SOMT low borderline
XP_010412902.1 Alkaloid 7DLGT medium pass
XP_010413790.2 Alkaloid 7DLGT low borderline
XP_010414084.1 Alkaloid 7DLGT medium pass
XP_010414087.1 Alkaloid 7DLGT low borderline
XP_010414297.1 Alkaloid 7DLGT low borderline
XP_010414298.1 Alkaloid 7DLGT low borderline
XP_010414299.1 Alkaloid 7DLGT low borderline
XP_010414300.1 Alkaloid 7DLGT low borderline
XP_010414302.1 Alkaloid 7DLGT low borderline
XP_010414303.1 Alkaloid 7DLGT low borderline
XP_010414342.1 Alkaloid 7DLGT low borderline
XP_010414446.1 Alkaloid 7DLGT medium pass
XP_010414605.1 Alkaloid 7DLGT low borderline
XP_010416989.1 Alkaloid 7DLGT low borderline
XP_010417017.1 Alkaloid 7DLGT low borderline
XP_010417075.2 Alkaloid 7DLGT medium pass
XP_010417441.1 Alkaloid 7DLGT low borderline
XP_010418767.2 Alkaloid 7DLGT high pass
XP_010418780.1 Alkaloid 7DLGT low borderline
XP_010419269.1 Alkaloid 7DLGT low borderline
XP_010419848.1 Alkaloid 7DLGT low borderline
XP_010420136.2 Alkaloid 7DLGT low borderline
XP_010420413.1 Alkaloid 7DLGT low borderline
XP_010420739.1 Alkaloid 7DLGT low borderline
XP_010420749.2 Alkaloid 7DLGT medium pass
XP_010421892.1 Alkaloid 7DLGT low borderline
XP_010421894.1 Alkaloid 7DLGT low borderline
XP_010423413.1 Alkaloid 7DLGT high pass
XP_010423415.1 Alkaloid 7DLGT high pass
XP_010424133.1 Alkaloid 7DLGT low borderline
XP_010424796.1 Alkaloid 7DLGT low borderline
XP_010426106.1 Alkaloid 7DLGT medium pass
XP_010426107.1 Alkaloid 7DLGT high pass
XP_010426109.1 Alkaloid 7DLGT high pass
XP_010426110.1 Alkaloid 7DLGT high pass
XP_010426111.1 Alkaloid 7DLGT medium pass
XP_010426112.1 Alkaloid 7DLGT high pass
XP_010426113.1 Alkaloid 7DLGT high pass
XP_010426114.1 Alkaloid 7DLGT high pass
XP_010426115.1 Alkaloid 7DLGT high pass
XP_010426367.1 Alkaloid 7DLGT medium pass
XP_010427359.1 Alkaloid 7DLGT medium pass
XP_010427360.1 Alkaloid 7DLGT high pass
XP_010427361.1 Alkaloid 7DLGT high pass
XP_010427832.1 Alkaloid 7DLGT medium pass
XP_010428338.1 Alkaloid 7DLGT low borderline
XP_010429148.1 Alkaloid 7DLGT low borderline
XP_010429410.1 Alkaloid 7DLGT low borderline