PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
XP_010429670.2 Alkaloid 7DLGT low borderline
XP_010430963.1 Alkaloid 7DLGT medium pass
XP_010431052.1 Alkaloid 7DLGT low borderline
XP_010431053.1 Alkaloid 7DLGT high pass
XP_010431139.1 Alkaloid 7DLGT high pass
XP_010431140.1 Alkaloid 7DLGT high pass
XP_010431232.1 Alkaloid 7DLGT low borderline
XP_010431575.1 Alkaloid 7DLGT low borderline
XP_010432459.1 Alkaloid 7DLGT low borderline
XP_010433351.1 Alkaloid 7DLGT low borderline
XP_010434409.1 Alkaloid 7DLGT low borderline
XP_010434494.1 Alkaloid 7DLGT medium pass
XP_010434517.1 Alkaloid 7DLGT medium pass
XP_010434952.1 Alkaloid 7DLGT medium pass
XP_010434953.1 Alkaloid 7DLGT medium pass
XP_010434972.1 Alkaloid 7DLGT low borderline
XP_010434973.1 Alkaloid 7DLGT low borderline
XP_010434978.1 Alkaloid 7DLGT low borderline
XP_010435045.1 Alkaloid 7DLGT low borderline
XP_010435193.1 Alkaloid 7DLGT medium pass
XP_010437662.1 Alkaloid 7DLGT low borderline
XP_010437932.1 Alkaloid 7DLGT low borderline
XP_010437944.1 Alkaloid 7DLGT low borderline
XP_010438412.1 Alkaloid 7DLGT low borderline
XP_010440288.1 Alkaloid 7DLGT high pass
XP_010440299.1 Alkaloid 7DLGT low borderline
XP_010440301.1 Alkaloid 7DLGT low borderline
XP_010440903.1 Alkaloid 7DLGT medium pass
XP_010440904.1 Alkaloid 7DLGT medium pass
XP_010440905.1 Alkaloid 7DLGT medium pass
XP_010440988.1 Alkaloid 7DLGT low borderline
XP_010442178.1 Alkaloid 7DLGT medium pass
XP_010442438.1 Alkaloid 7DLGT low borderline
XP_010442973.1 Alkaloid 7DLGT low borderline
XP_010442975.1 Alkaloid 7DLGT low borderline
XP_010442976.1 Alkaloid 7DLGT low borderline
XP_010443720.2 Alkaloid 7DLGT high pass
XP_010444943.1 Alkaloid 7DLGT low borderline
XP_010445097.2 Alkaloid 7DLGT low borderline
XP_010445627.2 Alkaloid 7DLGT medium pass
XP_010446201.1 Alkaloid 7DLGT medium pass
XP_010446296.2 Alkaloid 7DLGT medium pass
XP_010446317.1 Alkaloid 7DLGT low borderline
XP_010446327.1 Alkaloid 7DLGT low borderline
XP_010446338.1 Alkaloid 7DLGT low borderline
XP_010447136.1 Alkaloid 7DLGT low borderline
XP_010447137.1 Alkaloid 7DLGT low borderline
XP_010447140.1 Alkaloid 7DLGT low borderline
XP_010447141.1 Alkaloid 7DLGT low borderline
XP_010448031.1 Alkaloid 7DLGT high pass