PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold40782450 Alkaloid 7DLGT medium pass
HhamSuperscaffold410804840 Alkaloid 7DLGT low borderline
HhamSuperscaffold410809030 Alkaloid 7DLGT low borderline
HhamSuperscaffold420826640 Alkaloid 7DLGT medium pass
HhamSuperscaffold420826650 Alkaloid 7DLGT medium pass
HhamSuperscaffold430831010 Alkaloid 7DLGT low borderline
HhamSuperscaffold430831270 Alkaloid 7DLGT medium pass
HhamSuperscaffold430831300 Alkaloid 7DLGT low borderline
HhamSuperscaffold430842590 Alkaloid 7DLGT low borderline
HhamSuperscaffold430844320 Alkaloid 7DLGT low borderline
HhamSuperscaffold430845020 Alkaloid 7DLGT low borderline
HhamSuperscaffold440857710 Alkaloid 7DLGT medium pass
HhamSuperscaffold450863270 Alkaloid 7DLGT low borderline
HhamSuperscaffold450870700 Alkaloid 7DLGT medium pass
HhamSuperscaffold450870730 Alkaloid 7DLGT medium pass
HhamSuperscaffold460876710 Alkaloid 7DLGT medium pass
HhamSuperscaffold460876720 Alkaloid 7DLGT medium pass
HhamSuperscaffold460876730 Alkaloid 7DLGT medium pass
HhamSuperscaffold460881500 Alkaloid 7DLGT low borderline
HhamSuperscaffold50891980 Alkaloid 7DLGT low borderline
HhamSuperscaffold50891990 Alkaloid 7DLGT low borderline
HhamSuperscaffold50894450 Alkaloid 7DLGT low borderline
HhamSuperscaffold50894460 Alkaloid 7DLGT low borderline
HhamSuperscaffold50894980 Alkaloid 7DLGT low borderline
HhamSuperscaffold50895570 Alkaloid 7DLGT low borderline
HhamSuperscaffold50895880 Alkaloid 7DLGT low borderline
HhamSuperscaffold50901840 Alkaloid 7DLGT low borderline
HhamSuperscaffold50910020 Alkaloid 7DLGT low borderline
HhamSuperscaffold60925590 Alkaloid 7DLGT low borderline
HhamSuperscaffold60925610 Alkaloid 7DLGT low borderline
HhamSuperscaffold60930340 Alkaloid 7DLGT low borderline
HhamSuperscaffold60939260 Alkaloid 7DLGT medium pass
HhamSuperscaffold60939730 Alkaloid 7DLGT medium pass
HhamSuperscaffold60943780 Alkaloid 7DLGT low borderline
HhamSuperscaffold60954380 Alkaloid 7DLGT low borderline
HhamSuperscaffold70966070 Alkaloid 7DLGT low borderline
HhamSuperscaffold70966080 Alkaloid 7DLGT low borderline
HhamSuperscaffold70975680 Alkaloid 7DLGT low borderline
HhamSuperscaffold70975690 Alkaloid 7DLGT low borderline
HhamSuperscaffold70985260 Alkaloid 7DLGT low borderline
HhamSuperscaffold70993850 Alkaloid 7DLGT low borderline
HhamSuperscaffold81010410 Alkaloid 7DLGT low borderline
HhamSuperscaffold81010460 Alkaloid 7DLGT medium pass
HhamSuperscaffold81023280 Alkaloid 7DLGT medium pass
HhamSuperscaffold91027870 Alkaloid 7DLGT medium pass
HhamSuperscaffold91028040 Alkaloid 7DLGT low borderline
HhamSuperscaffold91028050 Alkaloid 7DLGT low borderline
HhamSuperscaffold91028060 Alkaloid 7DLGT low borderline
HhamSuperscaffold91028070 Alkaloid 7DLGT low borderline
HhamSuperscaffold91033760 Alkaloid 7DLGT medium pass