PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold80998290 Terpenoid GGPPS medium borderline
HhamSuperscaffold81016060 Terpenoid GGPPS medium borderline
HhamSuperscaffold200348750 Terpenoid GPPS low borderline
HhamSuperscaffold120101870 Terpenoid HDR/IspH low borderline
HhamSuperscaffold290511310 Terpenoid HDR/IspH high pass
HhamSuperscaffold30578360 Terpenoid HDR/IspH high pass
HhamSuperscaffold60954170 Terpenoid HDR/IspH high pass
HhamSuperscaffold81010100 Terpenoid HDR/IspH high pass
HhamSuperscaffold91028350 Terpenoid HDR/IspH high pass
HhamSuperscaffold91028460 Terpenoid HDR/IspH high pass
HhamSuperscaffold10005650 Terpenoid HDS/IspG high pass
HhamSuperscaffold120121860 Terpenoid HDS/IspG medium pass
HhamSuperscaffold180264430 Terpenoid HDS/IspG high pass
HhamSuperscaffold300589820 Terpenoid HDS/IspG high pass
HhamSuperscaffold370705030 Terpenoid HDS/IspG low borderline
HhamSuperscaffold140175690 Terpenoid HMGR medium pass
HhamSuperscaffold150178630 Terpenoid HMGR medium pass
HhamSuperscaffold150179990 Terpenoid HMGR medium pass
HhamSuperscaffold170239990 Terpenoid HMGR medium pass
HhamSuperscaffold20298150 Terpenoid HMGR medium pass
HhamSuperscaffold20334990 Terpenoid HMGR medium pass
HhamSuperscaffold280502560 Terpenoid HMGR medium pass
HhamSuperscaffold290511990 Terpenoid HMGR medium pass
HhamSuperscaffold300594250 Terpenoid HMGR medium pass
HhamSuperscaffold30554500 Terpenoid HMGR medium pass
HhamSuperscaffold330636850 Terpenoid HMGR medium pass
HhamSuperscaffold380716130 Terpenoid HMGR medium pass
HhamSuperscaffold390741510 Terpenoid HMGR low borderline
HhamSuperscaffold40756310 Terpenoid HMGR medium pass
HhamSuperscaffold430837800 Terpenoid HMGR medium pass
HhamSuperscaffold430847220 Terpenoid HMGR medium pass
HhamSuperscaffold460882720 Terpenoid HMGR medium pass
HhamSuperscaffold60953740 Terpenoid HMGR medium pass
HhamSuperscaffold70988540 Terpenoid HMGR medium pass
HhamSuperscaffold91029000 Terpenoid HMGR medium pass
HhamSuperscaffold10015910 Terpenoid HMGS high pass
HhamSuperscaffold120104270 Terpenoid HMGS high pass
HhamSuperscaffold120118100 Terpenoid HMGS low borderline
HhamSuperscaffold120122400 Terpenoid HMGS low borderline
HhamSuperscaffold130132140 Terpenoid HMGS high pass
HhamSuperscaffold130140410 Terpenoid HMGS low borderline
HhamSuperscaffold180264230 Terpenoid HMGS low borderline
HhamSuperscaffold180264500 Terpenoid HMGS low borderline
HhamSuperscaffold290517610 Terpenoid HMGS high pass
HhamSuperscaffold30556600 Terpenoid HMGS high pass
HhamSuperscaffold310604850 Terpenoid HMGS high pass
HhamSuperscaffold390739580 Terpenoid HMGS high pass
HhamSuperscaffold410807200 Terpenoid HMGS medium pass
HhamSuperscaffold130150950 Terpenoid IDI low borderline
HhamSuperscaffold150179030 Terpenoid IDI low borderline