PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold180263780 Terpenoid IDI medium pass
HhamSuperscaffold180263790 Terpenoid IDI medium pass
HhamSuperscaffold230409840 Terpenoid IDI medium pass
HhamSuperscaffold280499990 Terpenoid IDI medium pass
HhamSuperscaffold300592020 Terpenoid IDI medium pass
HhamSuperscaffold310611050 Terpenoid IDI medium pass
HhamSuperscaffold60954540 Terpenoid IDI low borderline
HhamSuperscaffold81017820 Terpenoid IDI medium pass
Hhamunanchor3791064130 Terpenoid IDI medium pass
HhamSuperscaffold10000350 Terpenoid MCT/IspD low borderline
HhamSuperscaffold10032810 Terpenoid MCT/IspD high pass
HhamSuperscaffold130155520 Terpenoid MCT/IspD low borderline
HhamSuperscaffold50915360 Terpenoid MCT/IspD high pass
HhamSuperscaffold60945250 Terpenoid MCT/IspD low borderline
Hhamunanchor4961066750 Terpenoid MCT/IspD low borderline
HhamSuperscaffold220374560 Terpenoid MDS/IspF medium pass
HhamSuperscaffold340654390 Terpenoid MDS/IspF high pass
HhamSuperscaffold380718840 Terpenoid MDS/IspF low borderline
HhamSuperscaffold400798760 Terpenoid MDS/IspF high pass
HhamSuperscaffold70978030 Terpenoid MDS/IspF high pass
HhamSuperscaffold70981290 Terpenoid MDS/IspF low borderline
HhamSuperscaffold10035770 Terpenoid MVD low borderline
HhamSuperscaffold120117330 Terpenoid MVD low borderline
HhamSuperscaffold180251540 Terpenoid MVD low borderline
HhamSuperscaffold180261660 Terpenoid MVD low borderline
HhamSuperscaffold190286820 Terpenoid MVD low borderline
HhamSuperscaffold20318330 Terpenoid MVD low borderline
HhamSuperscaffold220382420 Terpenoid MVD medium pass
HhamSuperscaffold230406280 Terpenoid MVD medium pass
HhamSuperscaffold230406340 Terpenoid MVD medium pass
HhamSuperscaffold250454570 Terpenoid MVD low borderline
HhamSuperscaffold340662980 Terpenoid MVD medium pass
HhamSuperscaffold340667480 Terpenoid MVD low borderline
HhamSuperscaffold400789470 Terpenoid MVD medium pass
HhamSuperscaffold60933200 Terpenoid MVD low borderline
HhamSuperscaffold70989350 Terpenoid MVD medium pass
HhamSuperscaffold91044860 Terpenoid MVD low borderline
HhamSuperscaffold110077200 Terpenoid MVK medium pass
HhamSuperscaffold20334240 Terpenoid MVK low borderline
HhamSuperscaffold290512090 Terpenoid MVK low borderline
HhamSuperscaffold310617430 Terpenoid MVK medium pass
HhamSuperscaffold320619930 Terpenoid MVK low borderline
HhamSuperscaffold350671270 Terpenoid MVK medium pass
HhamSuperscaffold370698820 Terpenoid MVK low borderline
HhamSuperscaffold380717000 Terpenoid MVK low borderline
HhamSuperscaffold40772860 Terpenoid MVK low borderline
HhamSuperscaffold40774410 Terpenoid MVK medium pass
HhamSuperscaffold420818850 Terpenoid MVK low borderline
HhamSuperscaffold430846370 Terpenoid MVK low borderline
HhamSuperscaffold50893290 Terpenoid MVK low borderline