PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold260470140 Alkaloid MPO low borderline
HhamSuperscaffold270480300 Alkaloid MPO medium pass
HhamSuperscaffold280506810 Alkaloid MPO medium pass
HhamSuperscaffold290516250 Alkaloid MPO medium pass
HhamSuperscaffold30554820 Alkaloid MPO high pass
HhamSuperscaffold30581980 Alkaloid MPO high pass
HhamSuperscaffold310610340 Alkaloid MPO high pass
HhamSuperscaffold370711470 Alkaloid MPO low borderline
HhamSuperscaffold420824090 Alkaloid MPO high pass
HhamSuperscaffold70981630 Alkaloid MPO medium pass
HhamSuperscaffold81003330 Alkaloid MPO high pass
HhamSuperscaffold81023550 Alkaloid MPO medium pass
HhamSuperscaffold10010460 Alkaloid NCS medium borderline
HhamSuperscaffold160215310 Alkaloid NCS medium borderline
HhamSuperscaffold160216900 Alkaloid NCS medium pass
HhamSuperscaffold170224550 Alkaloid NCS medium borderline
HhamSuperscaffold200345380 Alkaloid NCS medium borderline
HhamSuperscaffold20291890 Alkaloid NCS low borderline
HhamSuperscaffold20291900 Alkaloid NCS low borderline
HhamSuperscaffold20293460 Alkaloid NCS medium borderline
HhamSuperscaffold20305590 Alkaloid NCS medium borderline
HhamSuperscaffold20332780 Alkaloid NCS medium pass
HhamSuperscaffold20332790 Alkaloid NCS medium pass
HhamSuperscaffold210367640 Alkaloid NCS medium borderline
HhamSuperscaffold220374050 Alkaloid NCS medium borderline
HhamSuperscaffold220378830 Alkaloid NCS medium borderline
HhamSuperscaffold220388640 Alkaloid NCS medium borderline
HhamSuperscaffold230412550 Alkaloid NCS medium borderline
HhamSuperscaffold240420440 Alkaloid NCS medium borderline
HhamSuperscaffold240425150 Alkaloid NCS medium borderline
HhamSuperscaffold270480030 Alkaloid NCS medium borderline
HhamSuperscaffold270480970 Alkaloid NCS low borderline
HhamSuperscaffold300585050 Alkaloid NCS medium borderline
HhamSuperscaffold30542430 Alkaloid NCS medium borderline
HhamSuperscaffold30542440 Alkaloid NCS medium borderline
HhamSuperscaffold30542450 Alkaloid NCS medium borderline
HhamSuperscaffold30542460 Alkaloid NCS medium borderline
HhamSuperscaffold30542470 Alkaloid NCS medium borderline
HhamSuperscaffold30557600 Alkaloid NCS medium borderline
HhamSuperscaffold30557610 Alkaloid NCS medium borderline
HhamSuperscaffold30572260 Alkaloid NCS medium borderline
HhamSuperscaffold30572560 Alkaloid NCS medium borderline
HhamSuperscaffold30572570 Alkaloid NCS medium borderline
HhamSuperscaffold30572580 Alkaloid NCS medium borderline
HhamSuperscaffold30572590 Alkaloid NCS medium borderline
HhamSuperscaffold30572600 Alkaloid NCS medium borderline
HhamSuperscaffold310605730 Alkaloid NCS medium borderline
HhamSuperscaffold310617670 Alkaloid NCS medium pass
HhamSuperscaffold310617680 Alkaloid NCS medium pass
HhamSuperscaffold310617690 Alkaloid NCS medium pass