PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
HhamSuperscaffold320626480 Alkaloid NCS medium pass NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold320634170 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold350671030 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
HhamSuperscaffold350679400 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold370713180 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold380730170 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
HhamSuperscaffold380730200 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
HhamSuperscaffold380730300 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
HhamSuperscaffold380730320 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
HhamSuperscaffold390738930 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold400787050 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold400789890 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold400798450 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold40753630 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold40774610 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
HhamSuperscaffold410806650 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold410812560 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold420817330 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold420819740 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold420819760 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold430833130 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
HhamSuperscaffold430844630 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
HhamSuperscaffold430845970 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold50893770 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
HhamSuperscaffold70981910 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold70982110 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
HhamSuperscaffold10001020 Alkaloid NMT low borderline NMT__00060__sp_Q9MAT5_ANM10_ARATH
HhamSuperscaffold100073340 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
HhamSuperscaffold100074040 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold10017630 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold10024960 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold10031430 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold10031490 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
HhamSuperscaffold10036960 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold10042420 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
HhamSuperscaffold10044080 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
HhamSuperscaffold110083310 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
HhamSuperscaffold110084520 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold110084530 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold110084540 Alkaloid NMT low borderline NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold110089660 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
HhamSuperscaffold110090100 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
HhamSuperscaffold110094050 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
HhamSuperscaffold110094060 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
HhamSuperscaffold110098300 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
HhamSuperscaffold110099750 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
HhamSuperscaffold120110740 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold120110750 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
HhamSuperscaffold120116890 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
HhamSuperscaffold120123740 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI