PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold70971110 Alkaloid SGD low borderline
HhamSuperscaffold70980120 Alkaloid SGD medium pass
HhamSuperscaffold70980150 Alkaloid SGD medium pass
HhamSuperscaffold70991410 Alkaloid SGD medium pass
HhamSuperscaffold81000240 Alkaloid SGD medium pass
HhamSuperscaffold81000250 Alkaloid SGD low borderline
HhamSuperscaffold81025520 Alkaloid SGD medium pass
HhamSuperscaffold91027900 Alkaloid SGD medium pass
Hhamunanchor1221056740 Alkaloid SGD medium pass
Hhamunanchor1281056920 Alkaloid SGD low borderline
Hhamunanchor5851068620 Alkaloid SGD medium pass
Hhamunanchor5871068650 Alkaloid SGD low borderline
HhamSuperscaffold10001030 Alkaloid SLS medium borderline
HhamSuperscaffold10001800 Alkaloid SLS medium borderline
HhamSuperscaffold100050630 Alkaloid SLS medium borderline
HhamSuperscaffold100058240 Alkaloid SLS low borderline
HhamSuperscaffold10032460 Alkaloid SLS medium borderline
HhamSuperscaffold110076790 Alkaloid SLS medium borderline
HhamSuperscaffold120116210 Alkaloid SLS medium borderline
HhamSuperscaffold120127090 Alkaloid SLS medium borderline
HhamSuperscaffold130154740 Alkaloid SLS medium borderline
HhamSuperscaffold140160530 Alkaloid SLS medium borderline
HhamSuperscaffold140167130 Alkaloid SLS medium borderline
HhamSuperscaffold150190170 Alkaloid SLS medium borderline
HhamSuperscaffold160204980 Alkaloid SLS low borderline
HhamSuperscaffold170224610 Alkaloid SLS medium borderline
HhamSuperscaffold180243240 Alkaloid SLS medium borderline
HhamSuperscaffold180262950 Alkaloid SLS medium borderline
HhamSuperscaffold20290450 Alkaloid SLS low borderline
HhamSuperscaffold20329580 Alkaloid SLS medium borderline
HhamSuperscaffold20333760 Alkaloid SLS medium borderline
HhamSuperscaffold20333770 Alkaloid SLS medium borderline
HhamSuperscaffold210363900 Alkaloid SLS medium borderline
HhamSuperscaffold230395500 Alkaloid SLS medium borderline
HhamSuperscaffold230400300 Alkaloid SLS medium borderline
HhamSuperscaffold240427670 Alkaloid SLS medium borderline
HhamSuperscaffold240428050 Alkaloid SLS medium borderline
HhamSuperscaffold280494320 Alkaloid SLS medium borderline
HhamSuperscaffold280500930 Alkaloid SLS medium borderline
HhamSuperscaffold300584590 Alkaloid SLS medium borderline
HhamSuperscaffold30583660 Alkaloid SLS medium borderline
HhamSuperscaffold30583670 Alkaloid SLS medium borderline
HhamSuperscaffold330642860 Alkaloid SLS medium borderline
HhamSuperscaffold340653970 Alkaloid SLS medium borderline
HhamSuperscaffold370712510 Alkaloid SLS medium borderline
HhamSuperscaffold380717360 Alkaloid SLS medium borderline
HhamSuperscaffold390734530 Alkaloid SLS medium borderline
HhamSuperscaffold40751180 Alkaloid SLS medium borderline
HhamSuperscaffold40751210 Alkaloid SLS medium borderline
HhamSuperscaffold40757230 Alkaloid SLS medium borderline