PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold410810060 Alkaloid SLS low borderline
HhamSuperscaffold430831720 Alkaloid SLS medium pass
HhamSuperscaffold430838850 Alkaloid SLS medium borderline
HhamSuperscaffold430845660 Alkaloid SLS medium borderline
HhamSuperscaffold430845670 Alkaloid SLS medium borderline
HhamSuperscaffold430845680 Alkaloid SLS medium borderline
HhamSuperscaffold440858850 Alkaloid SLS medium borderline
HhamSuperscaffold50915630 Alkaloid SLS medium borderline
HhamSuperscaffold50917940 Alkaloid SLS medium borderline
HhamSuperscaffold60927170 Alkaloid SLS medium borderline
HhamSuperscaffold60928790 Alkaloid SLS medium borderline
HhamSuperscaffold60948890 Alkaloid SLS medium borderline
HhamSuperscaffold60956480 Alkaloid SLS medium borderline
HhamSuperscaffold70973190 Alkaloid SLS medium borderline
HhamSuperscaffold81012100 Alkaloid SLS medium borderline
HhamSuperscaffold81018650 Alkaloid SLS medium borderline
Hhamunanchor13421057190 Alkaloid SLS medium pass
Hhamunanchor2991062520 Alkaloid SLS medium borderline
Hhamunanchor4171064970 Alkaloid SLS medium borderline
HhamSuperscaffold10003900 Alkaloid STR low borderline
HhamSuperscaffold100052130 Alkaloid STR low borderline
HhamSuperscaffold100052510 Alkaloid STR medium pass
HhamSuperscaffold100052570 Alkaloid STR medium pass
HhamSuperscaffold100071110 Alkaloid STR low borderline
HhamSuperscaffold10007180 Alkaloid STR low borderline
HhamSuperscaffold100072050 Alkaloid STR low borderline
HhamSuperscaffold10007810 Alkaloid STR low borderline
HhamSuperscaffold10018570 Alkaloid STR low borderline
HhamSuperscaffold10045570 Alkaloid STR low borderline
HhamSuperscaffold110075550 Alkaloid STR medium pass
HhamSuperscaffold110078840 Alkaloid STR medium pass
HhamSuperscaffold110083420 Alkaloid STR medium pass
HhamSuperscaffold110083440 Alkaloid STR medium pass
HhamSuperscaffold120102520 Alkaloid STR medium pass
HhamSuperscaffold120107270 Alkaloid STR low borderline
HhamSuperscaffold120120370 Alkaloid STR low borderline
HhamSuperscaffold120120880 Alkaloid STR low borderline
HhamSuperscaffold120123750 Alkaloid STR low borderline
HhamSuperscaffold130134680 Alkaloid STR low borderline
HhamSuperscaffold130137480 Alkaloid STR low borderline
HhamSuperscaffold130138140 Alkaloid STR low borderline
HhamSuperscaffold130147390 Alkaloid STR low borderline
HhamSuperscaffold130147970 Alkaloid STR low borderline
HhamSuperscaffold130148530 Alkaloid STR low borderline
HhamSuperscaffold130151430 Alkaloid STR medium pass
HhamSuperscaffold140170090 Alkaloid STR low borderline
HhamSuperscaffold140171080 Alkaloid STR low borderline
HhamSuperscaffold150186470 Alkaloid STR low borderline
HhamSuperscaffold160203070 Alkaloid STR medium pass
HhamSuperscaffold160206520 Alkaloid STR low borderline