PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
HhamSuperscaffold20333210 Alkaloid 7DLGT low borderline
HhamSuperscaffold20333260 Alkaloid 7DLGT low borderline
HhamSuperscaffold20333270 Alkaloid 7DLGT low borderline
HhamSuperscaffold20333280 Alkaloid 7DLGT low borderline
HhamSuperscaffold20333290 Alkaloid 7DLGT low borderline
HhamSuperscaffold20335090 Alkaloid 7DLGT high pass
HhamSuperscaffold210359670 Alkaloid 7DLGT low borderline
HhamSuperscaffold210366240 Alkaloid 7DLGT medium pass
HhamSuperscaffold210366250 Alkaloid 7DLGT medium pass
HhamSuperscaffold210366260 Alkaloid 7DLGT low borderline
HhamSuperscaffold210367450 Alkaloid 7DLGT low borderline
HhamSuperscaffold210367480 Alkaloid 7DLGT medium pass
HhamSuperscaffold210367490 Alkaloid 7DLGT low borderline
HhamSuperscaffold210367510 Alkaloid 7DLGT medium pass
HhamSuperscaffold210367520 Alkaloid 7DLGT low borderline
HhamSuperscaffold210367530 Alkaloid 7DLGT low borderline
HhamSuperscaffold210370900 Alkaloid 7DLGT high pass
HhamSuperscaffold210370910 Alkaloid 7DLGT high pass
HhamSuperscaffold210370940 Alkaloid 7DLGT high pass
HhamSuperscaffold230393830 Alkaloid 7DLGT medium pass
HhamSuperscaffold230394850 Alkaloid 7DLGT low borderline
HhamSuperscaffold230396430 Alkaloid 7DLGT medium pass
HhamSuperscaffold230404920 Alkaloid 7DLGT medium pass
HhamSuperscaffold240416770 Alkaloid 7DLGT low borderline
HhamSuperscaffold240418320 Alkaloid 7DLGT medium pass
HhamSuperscaffold240421080 Alkaloid 7DLGT low borderline
HhamSuperscaffold240422160 Alkaloid 7DLGT medium pass
HhamSuperscaffold240436490 Alkaloid 7DLGT low borderline
HhamSuperscaffold240440010 Alkaloid 7DLGT medium pass
HhamSuperscaffold250450110 Alkaloid 7DLGT medium pass
HhamSuperscaffold250452480 Alkaloid 7DLGT high pass
HhamSuperscaffold250452490 Alkaloid 7DLGT high pass
HhamSuperscaffold250453000 Alkaloid 7DLGT low borderline
HhamSuperscaffold260476630 Alkaloid 7DLGT medium pass
HhamSuperscaffold260476690 Alkaloid 7DLGT medium pass
HhamSuperscaffold260476940 Alkaloid 7DLGT medium pass
HhamSuperscaffold270478200 Alkaloid 7DLGT low borderline
HhamSuperscaffold270478650 Alkaloid 7DLGT medium pass
HhamSuperscaffold270478660 Alkaloid 7DLGT medium pass
HhamSuperscaffold270478670 Alkaloid 7DLGT high pass
HhamSuperscaffold270484140 Alkaloid 7DLGT medium pass
HhamSuperscaffold270486980 Alkaloid 7DLGT low borderline
HhamSuperscaffold270488420 Alkaloid 7DLGT low borderline
HhamSuperscaffold270490430 Alkaloid 7DLGT high pass
HhamSuperscaffold270491890 Alkaloid 7DLGT low borderline
HhamSuperscaffold280498980 Alkaloid 7DLGT high pass
HhamSuperscaffold280503730 Alkaloid 7DLGT medium pass
HhamSuperscaffold280503740 Alkaloid 7DLGT low borderline
HhamSuperscaffold290511020 Alkaloid 7DLGT low borderline
HhamSuperscaffold290516020 Alkaloid 7DLGT medium pass