PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
HhamSuperscaffold290531680 Alkaloid 7DLGT low borderline
HhamSuperscaffold300589390 Alkaloid 7DLGT medium pass
HhamSuperscaffold300590090 Alkaloid 7DLGT high pass
HhamSuperscaffold300594490 Alkaloid 7DLGT medium pass
HhamSuperscaffold300595090 Alkaloid 7DLGT low borderline
HhamSuperscaffold300595100 Alkaloid 7DLGT low borderline
HhamSuperscaffold300595110 Alkaloid 7DLGT low borderline
HhamSuperscaffold300595140 Alkaloid 7DLGT low borderline
HhamSuperscaffold30539110 Alkaloid 7DLGT low borderline
HhamSuperscaffold30547130 Alkaloid 7DLGT low borderline
HhamSuperscaffold30550300 Alkaloid 7DLGT medium pass
HhamSuperscaffold30550310 Alkaloid 7DLGT medium pass
HhamSuperscaffold30550880 Alkaloid 7DLGT low borderline
HhamSuperscaffold30554290 Alkaloid 7DLGT medium pass
HhamSuperscaffold30559370 Alkaloid 7DLGT high pass
HhamSuperscaffold30560090 Alkaloid 7DLGT high pass
HhamSuperscaffold30561710 Alkaloid 7DLGT low borderline
HhamSuperscaffold30563940 Alkaloid 7DLGT low borderline
HhamSuperscaffold30564130 Alkaloid 7DLGT medium pass
HhamSuperscaffold30578120 Alkaloid 7DLGT high pass
HhamSuperscaffold30578830 Alkaloid 7DLGT medium pass
HhamSuperscaffold30581750 Alkaloid 7DLGT medium pass
HhamSuperscaffold310602490 Alkaloid 7DLGT low borderline
HhamSuperscaffold310608370 Alkaloid 7DLGT low borderline
HhamSuperscaffold310609300 Alkaloid 7DLGT low borderline
HhamSuperscaffold320621920 Alkaloid 7DLGT low borderline
HhamSuperscaffold320625660 Alkaloid 7DLGT low borderline
HhamSuperscaffold320632760 Alkaloid 7DLGT medium pass
HhamSuperscaffold330636660 Alkaloid 7DLGT high pass
HhamSuperscaffold330638770 Alkaloid 7DLGT low borderline
HhamSuperscaffold330638790 Alkaloid 7DLGT low borderline
HhamSuperscaffold330638830 Alkaloid 7DLGT low borderline
HhamSuperscaffold330645460 Alkaloid 7DLGT low borderline
HhamSuperscaffold330648050 Alkaloid 7DLGT medium pass
HhamSuperscaffold330652610 Alkaloid 7DLGT low borderline
HhamSuperscaffold340661850 Alkaloid 7DLGT low borderline
HhamSuperscaffold340661860 Alkaloid 7DLGT medium pass
HhamSuperscaffold350670010 Alkaloid 7DLGT low borderline
HhamSuperscaffold350672510 Alkaloid 7DLGT low borderline
HhamSuperscaffold350678220 Alkaloid 7DLGT medium pass
HhamSuperscaffold350678230 Alkaloid 7DLGT low borderline
HhamSuperscaffold350678250 Alkaloid 7DLGT medium pass
HhamSuperscaffold360684970 Alkaloid 7DLGT high pass
HhamSuperscaffold360690120 Alkaloid 7DLGT medium pass
HhamSuperscaffold370705010 Alkaloid 7DLGT low borderline
HhamSuperscaffold380717780 Alkaloid 7DLGT low borderline
HhamSuperscaffold380723270 Alkaloid 7DLGT low borderline
HhamSuperscaffold380727570 Alkaloid 7DLGT medium pass
HhamSuperscaffold380727590 Alkaloid 7DLGT high pass
HhamSuperscaffold380731990 Alkaloid 7DLGT low borderline