PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold260475170 Alkaloid T3O medium borderline
HhamSuperscaffold260477210 Alkaloid T3O low borderline
HhamSuperscaffold270479520 Alkaloid T3O medium pass
HhamSuperscaffold270486380 Alkaloid T3O medium borderline
HhamSuperscaffold270488040 Alkaloid T3O medium borderline
HhamSuperscaffold270488060 Alkaloid T3O medium borderline
HhamSuperscaffold270488370 Alkaloid T3O medium borderline
HhamSuperscaffold270490130 Alkaloid T3O medium borderline
HhamSuperscaffold270490150 Alkaloid T3O medium borderline
HhamSuperscaffold280499000 Alkaloid T3O medium pass
HhamSuperscaffold280505920 Alkaloid T3O medium borderline
HhamSuperscaffold280507030 Alkaloid T3O medium borderline
HhamSuperscaffold290510800 Alkaloid T3O medium pass
HhamSuperscaffold290516600 Alkaloid T3O medium borderline
HhamSuperscaffold290516610 Alkaloid T3O medium borderline
HhamSuperscaffold290517220 Alkaloid T3O medium pass
HhamSuperscaffold290517670 Alkaloid T3O medium borderline
HhamSuperscaffold290526430 Alkaloid T3O medium pass
HhamSuperscaffold290526440 Alkaloid T3O medium borderline
HhamSuperscaffold300594060 Alkaloid T3O low borderline
HhamSuperscaffold300596830 Alkaloid T3O medium borderline
HhamSuperscaffold30539430 Alkaloid T3O low borderline
HhamSuperscaffold30548870 Alkaloid T3O medium pass
HhamSuperscaffold30551480 Alkaloid T3O medium pass
HhamSuperscaffold30552440 Alkaloid T3O medium pass
HhamSuperscaffold30552650 Alkaloid T3O medium pass
HhamSuperscaffold30555670 Alkaloid T3O low borderline
HhamSuperscaffold30555920 Alkaloid T3O medium borderline
HhamSuperscaffold30556660 Alkaloid T3O low borderline
HhamSuperscaffold30556960 Alkaloid T3O medium borderline
HhamSuperscaffold30558320 Alkaloid T3O medium pass
HhamSuperscaffold30559180 Alkaloid T3O medium borderline
HhamSuperscaffold30559310 Alkaloid T3O medium borderline
HhamSuperscaffold30571180 Alkaloid T3O medium pass
HhamSuperscaffold30574440 Alkaloid T3O medium pass
HhamSuperscaffold30574470 Alkaloid T3O medium pass
HhamSuperscaffold30578980 Alkaloid T3O medium pass
HhamSuperscaffold30579510 Alkaloid T3O medium borderline
HhamSuperscaffold30580910 Alkaloid T3O medium borderline
HhamSuperscaffold30583790 Alkaloid T3O medium borderline
HhamSuperscaffold30584050 Alkaloid T3O medium pass
HhamSuperscaffold310603980 Alkaloid T3O medium borderline
HhamSuperscaffold310605320 Alkaloid T3O medium borderline
HhamSuperscaffold310607710 Alkaloid T3O medium borderline
HhamSuperscaffold310608940 Alkaloid T3O low borderline
HhamSuperscaffold310612100 Alkaloid T3O medium borderline
HhamSuperscaffold320622140 Alkaloid T3O medium borderline
HhamSuperscaffold320623620 Alkaloid T3O medium pass
HhamSuperscaffold320629090 Alkaloid T3O medium borderline
HhamSuperscaffold320634200 Alkaloid T3O medium borderline