PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold320634770 Alkaloid T3O medium borderline
HhamSuperscaffold320634780 Alkaloid T3O medium borderline
HhamSuperscaffold320634790 Alkaloid T3O medium borderline
HhamSuperscaffold320634810 Alkaloid T3O medium borderline
HhamSuperscaffold330638340 Alkaloid T3O medium borderline
HhamSuperscaffold330638630 Alkaloid T3O low borderline
HhamSuperscaffold330638650 Alkaloid T3O medium pass
HhamSuperscaffold330640870 Alkaloid T3O medium borderline
HhamSuperscaffold330640890 Alkaloid T3O medium borderline
HhamSuperscaffold330640900 Alkaloid T3O medium borderline
HhamSuperscaffold330641280 Alkaloid T3O medium borderline
HhamSuperscaffold330641350 Alkaloid T3O medium borderline
HhamSuperscaffold330644080 Alkaloid T3O medium borderline
HhamSuperscaffold330647560 Alkaloid T3O medium borderline
HhamSuperscaffold330651240 Alkaloid T3O medium pass
HhamSuperscaffold330651760 Alkaloid T3O medium pass
HhamSuperscaffold340659760 Alkaloid T3O medium pass
HhamSuperscaffold340659820 Alkaloid T3O medium borderline
HhamSuperscaffold340661100 Alkaloid T3O medium borderline
HhamSuperscaffold340665890 Alkaloid T3O medium borderline
HhamSuperscaffold340665900 Alkaloid T3O medium borderline
HhamSuperscaffold340665920 Alkaloid T3O medium borderline
HhamSuperscaffold340665930 Alkaloid T3O medium borderline
HhamSuperscaffold350682400 Alkaloid T3O medium borderline
HhamSuperscaffold360687720 Alkaloid T3O low borderline
HhamSuperscaffold360691120 Alkaloid T3O medium borderline
HhamSuperscaffold370701430 Alkaloid T3O medium borderline
HhamSuperscaffold370701450 Alkaloid T3O medium borderline
HhamSuperscaffold370701470 Alkaloid T3O medium borderline
HhamSuperscaffold370707710 Alkaloid T3O medium pass
HhamSuperscaffold370708830 Alkaloid T3O low borderline
HhamSuperscaffold370710920 Alkaloid T3O low borderline
HhamSuperscaffold370713810 Alkaloid T3O medium borderline
HhamSuperscaffold370713830 Alkaloid T3O medium borderline
HhamSuperscaffold370713840 Alkaloid T3O medium borderline
HhamSuperscaffold370713850 Alkaloid T3O medium borderline
HhamSuperscaffold380716890 Alkaloid T3O medium borderline
HhamSuperscaffold380716900 Alkaloid T3O medium borderline
HhamSuperscaffold380718890 Alkaloid T3O medium pass
HhamSuperscaffold380719550 Alkaloid T3O medium borderline
HhamSuperscaffold380719580 Alkaloid T3O medium borderline
HhamSuperscaffold380719600 Alkaloid T3O medium borderline
HhamSuperscaffold380719610 Alkaloid T3O medium borderline
HhamSuperscaffold390735020 Alkaloid T3O medium borderline
HhamSuperscaffold390737340 Alkaloid T3O medium borderline
HhamSuperscaffold390738290 Alkaloid T3O medium pass
HhamSuperscaffold390739370 Alkaloid T3O medium borderline
HhamSuperscaffold390748210 Alkaloid T3O low borderline
HhamSuperscaffold400786900 Alkaloid T3O medium pass
HhamSuperscaffold400787870 Alkaloid T3O medium borderline