PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status
OBART06G22610.3 Terpenoid BAHD medium pass
OBART06G22610.4 Terpenoid BAHD medium pass
OBART06G26270.1 Terpenoid BAHD low borderline
OBART06G27190.1 Terpenoid BAHD medium pass
OBART06G27190.2 Terpenoid BAHD medium pass
OBART06G28250.1 Terpenoid BAHD low borderline
OBART07G08650.1 Terpenoid BAHD low borderline
OBART07G11320.1 Terpenoid BAHD low borderline
OBART07G12030.1 Terpenoid BAHD medium pass
OBART07G13700.1 Terpenoid BAHD medium pass
OBART07G13700.2 Terpenoid BAHD medium pass
OBART07G14260.1 Terpenoid BAHD low borderline
OBART07G17140.1 Terpenoid BAHD medium pass
OBART07G17170.1 Terpenoid BAHD medium pass
OBART07G18100.1 Terpenoid BAHD medium pass
OBART07G20500.1 Terpenoid BAHD medium pass
OBART07G20870.1 Terpenoid BAHD medium pass
OBART07G24980.1 Terpenoid BAHD low borderline
OBART08G00260.1 Terpenoid BAHD medium pass
OBART08G00860.1 Terpenoid BAHD low borderline
OBART08G00890.1 Terpenoid BAHD low borderline
OBART08G01990.1 Terpenoid BAHD medium pass
OBART08G02700.1 Terpenoid BAHD medium pass
OBART08G04510.1 Terpenoid BAHD low borderline
OBART08G05920.1 Terpenoid BAHD low borderline
OBART08G07480.1 Terpenoid BAHD medium pass
OBART08G15920.1 Terpenoid BAHD medium pass
OBART08G15920.2 Terpenoid BAHD medium pass
OBART08G21770.1 Terpenoid BAHD medium pass
OBART08G21770.2 Terpenoid BAHD medium pass
OBART08G22010.1 Terpenoid BAHD medium pass
OBART08G22300.1 Terpenoid BAHD low borderline
OBART08G22310.1 Terpenoid BAHD medium pass
OBART08G23280.1 Terpenoid BAHD medium pass
OBART08G23620.2 Terpenoid BAHD low borderline
OBART08G23800.1 Terpenoid BAHD medium pass
OBART09G10620.1 Terpenoid BAHD medium pass
OBART09G11990.1 Terpenoid BAHD medium pass
OBART09G13150.1 Terpenoid BAHD low borderline
OBART09G13160.1 Terpenoid BAHD medium pass
OBART09G15870.1 Terpenoid BAHD medium pass
OBART09G16160.1 Terpenoid BAHD medium pass
OBART09G16260.1 Terpenoid BAHD low borderline
OBART09G16670.1 Terpenoid BAHD medium pass
OBART09G17490.1 Terpenoid BAHD low borderline
OBART09G17490.2 Terpenoid BAHD low borderline
OBART09G17490.3 Terpenoid BAHD low borderline
OBART09G18310.1 Terpenoid BAHD low borderline
OBART09G19730.1 Terpenoid BAHD medium pass
OBART10G00070.1 Terpenoid BAHD medium pass