PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
OBART04G20190.1 Terpenoid CYP76 medium pass
OBART04G22140.1 Terpenoid CYP76 low borderline
OBART05G04530.1 Terpenoid CYP76 medium pass
OBART05G11670.1 Terpenoid CYP76 medium pass
OBART05G13350.1 Terpenoid CYP76 medium borderline
OBART05G16020.1 Terpenoid CYP76 low borderline
OBART05G16020.2 Terpenoid CYP76 low borderline
OBART05G16030.1 Terpenoid CYP76 low borderline
OBART05G16580.1 Terpenoid CYP76 low borderline
OBART05G16590.1 Terpenoid CYP76 low borderline
OBART05G16600.1 Terpenoid CYP76 low borderline
OBART05G17120.1 Terpenoid CYP76 medium borderline
OBART05G21360.1 Terpenoid CYP76 medium borderline
OBART05G22660.1 Terpenoid CYP76 medium borderline
OBART06G00070.1 Terpenoid CYP76 medium borderline
OBART06G06570.1 Terpenoid CYP76 medium borderline
OBART06G10230.1 Terpenoid CYP76 low borderline
OBART06G11550.1 Terpenoid CYP76 medium pass
OBART06G13110.1 Terpenoid CYP76 medium borderline
OBART06G14120.1 Terpenoid CYP76 medium borderline
OBART06G16210.1 Terpenoid CYP76 medium borderline
OBART06G17740.1 Terpenoid CYP76 low borderline
OBART06G18780.1 Terpenoid CYP76 low borderline
OBART06G18820.1 Terpenoid CYP76 low borderline
OBART06G18930.1 Terpenoid CYP76 medium borderline
OBART06G18930.2 Terpenoid CYP76 medium borderline
OBART06G18950.1 Terpenoid CYP76 low borderline
OBART06G18990.1 Terpenoid CYP76 low borderline
OBART06G19000.1 Terpenoid CYP76 low borderline
OBART06G19000.2 Terpenoid CYP76 low borderline
OBART06G20970.1 Terpenoid CYP76 medium borderline
OBART06G21840.1 Terpenoid CYP76 medium pass
OBART06G22380.1 Terpenoid CYP76 medium pass
OBART06G22440.1 Terpenoid CYP76 medium borderline
OBART07G07310.1 Terpenoid CYP76 low borderline
OBART07G07350.1 Terpenoid CYP76 medium pass
OBART07G10640.1 Terpenoid CYP76 low borderline
OBART07G12970.1 Terpenoid CYP76 low borderline
OBART07G12980.1 Terpenoid CYP76 low borderline
OBART07G14860.1 Terpenoid CYP76 low borderline
OBART07G16310.1 Terpenoid CYP76 low borderline
OBART07G21420.1 Terpenoid CYP76 medium pass
OBART08G00400.1 Terpenoid CYP76 medium borderline
OBART08G00410.1 Terpenoid CYP76 medium borderline
OBART08G01970.1 Terpenoid CYP76 low borderline
OBART08G03080.1 Terpenoid CYP76 low borderline
OBART08G06550.1 Terpenoid CYP76 medium borderline
OBART08G17080.1 Terpenoid CYP76 medium pass
OBART08G17500.1 Terpenoid CYP76 medium pass
OBART08G19870.1 Terpenoid CYP76 medium borderline