PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
OBART03G28210.1 Steroid DWF4/CYP90B1 medium borderline
OBART03G34950.1 Steroid DWF4/CYP90B1 low borderline
OBART03G34950.2 Steroid DWF4/CYP90B1 low borderline
OBART03G34950.4 Steroid DWF4/CYP90B1 low borderline
OBART03G41040.1 Steroid DWF4/CYP90B1 low borderline
OBART04G01550.1 Steroid DWF4/CYP90B1 low borderline
OBART04G02940.1 Steroid DWF4/CYP90B1 low borderline
OBART04G05400.1 Steroid DWF4/CYP90B1 low borderline
OBART04G11620.1 Steroid DWF4/CYP90B1 low borderline
OBART04G16250.1 Steroid DWF4/CYP90B1 low borderline
OBART04G16260.1 Steroid DWF4/CYP90B1 low borderline
OBART04G20190.1 Steroid DWF4/CYP90B1 low borderline
OBART05G14110.1 Steroid DWF4/CYP90B1 low borderline
OBART05G14670.1 Steroid DWF4/CYP90B1 low borderline
OBART05G16030.1 Steroid DWF4/CYP90B1 low borderline
OBART06G00620.1 Steroid DWF4/CYP90B1 medium borderline
OBART06G05840.1 Steroid DWF4/CYP90B1 low borderline
OBART06G05850.1 Steroid DWF4/CYP90B1 low borderline
OBART06G06570.1 Steroid DWF4/CYP90B1 low borderline
OBART06G18820.1 Steroid DWF4/CYP90B1 low borderline
OBART06G18930.2 Steroid DWF4/CYP90B1 low borderline
OBART06G18990.1 Steroid DWF4/CYP90B1 low borderline
OBART06G19000.1 Steroid DWF4/CYP90B1 low borderline
OBART06G21840.1 Steroid DWF4/CYP90B1 low borderline
OBART06G22380.1 Steroid DWF4/CYP90B1 low borderline
OBART06G22380.2 Steroid DWF4/CYP90B1 low borderline
OBART06G24350.1 Steroid DWF4/CYP90B1 low borderline
OBART07G07310.1 Steroid DWF4/CYP90B1 low borderline
OBART07G10620.1 Steroid DWF4/CYP90B1 low borderline
OBART07G10670.1 Steroid DWF4/CYP90B1 low borderline
OBART07G11730.1 Steroid DWF4/CYP90B1 low borderline
OBART07G11790.1 Steroid DWF4/CYP90B1 low borderline
OBART07G23430.1 Steroid DWF4/CYP90B1 low borderline
OBART07G23430.2 Steroid DWF4/CYP90B1 low borderline
OBART07G24320.1 Steroid DWF4/CYP90B1 low borderline
OBART08G06550.1 Steroid DWF4/CYP90B1 low borderline
OBART08G08100.1 Steroid DWF4/CYP90B1 low borderline
OBART08G17080.1 Steroid DWF4/CYP90B1 medium borderline
OBART08G19920.1 Steroid DWF4/CYP90B1 low borderline
OBART09G17630.1 Steroid DWF4/CYP90B1 low borderline
OBART10G01970.1 Steroid DWF4/CYP90B1 low borderline
OBART10G02230.1 Steroid DWF4/CYP90B1 low borderline
OBART10G03490.1 Steroid DWF4/CYP90B1 low borderline
OBART10G05550.1 Steroid DWF4/CYP90B1 low borderline
OBART10G05600.1 Steroid DWF4/CYP90B1 low borderline
OBART10G05600.2 Steroid DWF4/CYP90B1 low borderline
OBART10G06270.1 Steroid DWF4/CYP90B1 medium borderline
OBART10G08170.1 Steroid DWF4/CYP90B1 medium borderline
OBART10G08170.2 Steroid DWF4/CYP90B1 medium borderline
OBART10G15640.1 Steroid DWF4/CYP90B1 low borderline