PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
OBART04G08110.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART04G08120.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART04G08130.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART04G08140.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART04G08150.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART04G08170.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART04G25420.1 Terpenoid TPS low borderline TPS__00167__sp_Q84ZW8_ACSS_MAIZE
OBART04G25420.2 Terpenoid TPS low borderline TPS__00167__sp_Q84ZW8_ACSS_MAIZE
OBART05G09270.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART05G11030.1 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART05G11030.2 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
OBART08G02480.1 Terpenoid TPS medium pass TPS__00058__sp_B2C4D0_TS23B_MAIZE
OBART08G04100.1 Terpenoid TPS medium pass TPS__00073__sp_C7E5V8_FARS_ZEAMH
OBART08G04100.2 Terpenoid TPS medium pass TPS__00074__sp_C7E5V9_FARS_ZEADI
OBART08G04130.1 Terpenoid TPS medium pass TPS__00074__sp_C7E5V9_FARS_ZEADI
OBART08G04130.2 Terpenoid TPS medium pass TPS__00074__sp_C7E5V9_FARS_ZEADI
OBART08G04130.3 Terpenoid TPS medium pass TPS__00074__sp_C7E5V9_FARS_ZEADI
OBART08G04130.4 Terpenoid TPS medium pass TPS__00074__sp_C7E5V9_FARS_ZEADI
OBART09G05090.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
OBART09G05170.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
OBART10G14050.1 Terpenoid TPS medium pass TPS__00153__sp_Q29VN2_TPS2_MAIZE
OBART11G13300.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
OBART11G13300.2 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
OBART11G13300.3 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
OBART11G13300.4 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
OBART11G13300.5 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
OBART12G12550.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
OBART12G12590.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
OBART12G12600.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC