PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
OBART06G11370.1 Flavonoid UFGT high pass
OBART06G13890.1 Flavonoid UFGT high pass
OBART06G19890.1 Flavonoid UFGT medium pass
OBART06G25460.1 Flavonoid UFGT high pass
OBART07G03060.1 Flavonoid UFGT high pass
OBART07G06520.1 Flavonoid UFGT medium pass
OBART07G06540.1 Flavonoid UFGT medium pass
OBART07G06540.3 Flavonoid UFGT high pass
OBART07G06570.1 Flavonoid UFGT medium pass
OBART07G08420.1 Flavonoid UFGT high pass
OBART07G08430.1 Flavonoid UFGT medium pass
OBART07G08450.1 Flavonoid UFGT medium pass
OBART07G08470.1 Flavonoid UFGT high pass
OBART07G08560.1 Flavonoid UFGT high pass
OBART07G08930.1 Flavonoid UFGT medium pass
OBART07G14600.1 Flavonoid UFGT high pass
OBART07G14610.1 Flavonoid UFGT medium pass
OBART07G14740.1 Flavonoid UFGT medium pass
OBART07G15400.1 Flavonoid UFGT high pass
OBART07G15430.1 Flavonoid UFGT medium pass
OBART07G15440.1 Flavonoid UFGT medium pass
OBART07G15470.1 Flavonoid UFGT high pass
OBART07G18840.1 Flavonoid UFGT medium pass
OBART07G22670.1 Flavonoid UFGT medium pass
OBART07G25220.1 Flavonoid UFGT medium pass
OBART07G25970.1 Flavonoid UFGT medium pass
OBART08G04180.1 Flavonoid UFGT medium pass
OBART08G07730.1 Flavonoid UFGT medium pass
OBART09G00950.1 Flavonoid UFGT medium pass
OBART09G01530.1 Flavonoid UFGT low borderline
OBART09G05710.1 Flavonoid UFGT medium pass
OBART09G05740.1 Flavonoid UFGT high pass
OBART09G14380.1 Flavonoid UFGT medium pass
OBART09G14390.1 Flavonoid UFGT high pass
OBART09G16560.1 Flavonoid UFGT medium pass
OBART09G16560.2 Flavonoid UFGT high pass
OBART10G00960.1 Flavonoid UFGT high pass
OBART10G03260.1 Flavonoid UFGT high pass
OBART10G04850.1 Flavonoid UFGT low borderline
OBART10G05640.1 Flavonoid UFGT high pass
OBART10G06090.1 Flavonoid UFGT medium pass
OBART11G02810.1 Flavonoid UFGT medium pass
OBART11G02820.1 Flavonoid UFGT medium pass
OBART11G12060.1 Flavonoid UFGT medium pass
OBART11G12180.1 Flavonoid UFGT high pass
OBART11G12710.1 Flavonoid UFGT low borderline
OBART11G12720.1 Flavonoid UFGT medium pass
OBART11G12870.1 Flavonoid UFGT high pass
OBART11G18960.1 Flavonoid UFGT medium pass
OBART12G15810.1 Flavonoid UFGT high pass