PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART08G11790.2 Phenylpropanoid C4H/CYP73A low borderline
OBART10G02230.1 Phenylpropanoid C4H/CYP73A medium borderline
OBART12G05550.1 Phenylpropanoid C4H/CYP73A medium borderline
OBART01G18290.1 Phenylpropanoid CAD low borderline
OBART01G22460.1 Phenylpropanoid CAD low borderline
OBART02G06600.1 Phenylpropanoid CAD medium pass
OBART02G15730.1 Phenylpropanoid CAD low borderline
OBART02G15740.1 Phenylpropanoid CAD low borderline
OBART02G15770.1 Phenylpropanoid CAD low borderline
OBART02G21300.1 Phenylpropanoid CAD low borderline
OBART02G21300.2 Phenylpropanoid CAD low borderline
OBART02G21300.3 Phenylpropanoid CAD low borderline
OBART02G21300.4 Phenylpropanoid CAD low borderline
OBART03G06220.1 Phenylpropanoid CAD low borderline
OBART03G08900.1 Phenylpropanoid CAD medium pass
OBART03G17250.1 Phenylpropanoid CAD low borderline
OBART03G17250.2 Phenylpropanoid CAD low borderline
OBART03G17260.1 Phenylpropanoid CAD low borderline
OBART03G18130.1 Phenylpropanoid CAD low borderline
OBART03G18140.1 Phenylpropanoid CAD low borderline
OBART03G18170.1 Phenylpropanoid CAD medium pass
OBART03G18180.1 Phenylpropanoid CAD low borderline
OBART03G22150.1 Phenylpropanoid CAD low borderline
OBART03G22150.2 Phenylpropanoid CAD low borderline
OBART04G00410.1 Phenylpropanoid CAD medium pass
OBART04G02920.1 Phenylpropanoid CAD low borderline
OBART04G04980.1 Phenylpropanoid CAD medium pass
OBART04G07910.1 Phenylpropanoid CAD low borderline
OBART04G07920.1 Phenylpropanoid CAD low borderline
OBART04G07950.1 Phenylpropanoid CAD low borderline
OBART04G07990.1 Phenylpropanoid CAD low borderline
OBART04G07990.2 Phenylpropanoid CAD low borderline
OBART04G08010.1 Phenylpropanoid CAD low borderline
OBART04G08030.1 Phenylpropanoid CAD low borderline
OBART04G08090.1 Phenylpropanoid CAD medium pass
OBART04G08110.1 Phenylpropanoid CAD medium pass
OBART04G08130.1 Phenylpropanoid CAD low borderline
OBART04G08140.1 Phenylpropanoid CAD low borderline
OBART04G08150.1 Phenylpropanoid CAD low borderline
OBART04G08170.1 Phenylpropanoid CAD low borderline
OBART04G08760.1 Phenylpropanoid CAD low borderline
OBART04G08760.2 Phenylpropanoid CAD low borderline
OBART04G08760.3 Phenylpropanoid CAD low borderline
OBART04G08790.1 Phenylpropanoid CAD low borderline
OBART04G24800.1 Phenylpropanoid CAD medium borderline
OBART04G24800.2 Phenylpropanoid CAD medium borderline
OBART04G24800.3 Phenylpropanoid CAD medium borderline
OBART04G24800.4 Phenylpropanoid CAD low borderline
OBART04G25420.1 Phenylpropanoid CAD low borderline
OBART04G25420.2 Phenylpropanoid CAD low borderline