PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART06G18820.1 Steroid DWF4/CYP90B1 low borderline
OBART06G18930.2 Steroid DWF4/CYP90B1 low borderline
OBART06G18990.1 Steroid DWF4/CYP90B1 low borderline
OBART06G19000.1 Steroid DWF4/CYP90B1 low borderline
OBART06G21840.1 Steroid DWF4/CYP90B1 low borderline
OBART06G22380.1 Steroid DWF4/CYP90B1 low borderline
OBART06G22380.2 Steroid DWF4/CYP90B1 low borderline
OBART06G24350.1 Steroid DWF4/CYP90B1 low borderline
OBART07G07310.1 Steroid DWF4/CYP90B1 low borderline
OBART07G10620.1 Steroid DWF4/CYP90B1 low borderline
OBART07G10670.1 Steroid DWF4/CYP90B1 low borderline
OBART07G11730.1 Steroid DWF4/CYP90B1 low borderline
OBART07G11790.1 Steroid DWF4/CYP90B1 low borderline
OBART07G23430.1 Steroid DWF4/CYP90B1 low borderline
OBART07G23430.2 Steroid DWF4/CYP90B1 low borderline
OBART07G24320.1 Steroid DWF4/CYP90B1 low borderline
OBART08G06550.1 Steroid DWF4/CYP90B1 low borderline
OBART08G08100.1 Steroid DWF4/CYP90B1 low borderline
OBART08G17080.1 Steroid DWF4/CYP90B1 medium borderline
OBART08G19920.1 Steroid DWF4/CYP90B1 low borderline
OBART09G17630.1 Steroid DWF4/CYP90B1 low borderline
OBART10G01970.1 Steroid DWF4/CYP90B1 low borderline
OBART10G02230.1 Steroid DWF4/CYP90B1 low borderline
OBART10G03490.1 Steroid DWF4/CYP90B1 low borderline
OBART10G05550.1 Steroid DWF4/CYP90B1 low borderline
OBART10G05600.1 Steroid DWF4/CYP90B1 low borderline
OBART10G05600.2 Steroid DWF4/CYP90B1 low borderline
OBART10G06270.1 Steroid DWF4/CYP90B1 medium borderline
OBART10G08170.1 Steroid DWF4/CYP90B1 medium borderline
OBART10G08170.2 Steroid DWF4/CYP90B1 medium borderline
OBART10G15640.1 Steroid DWF4/CYP90B1 low borderline
OBART10G16360.1 Steroid DWF4/CYP90B1 low borderline
OBART10G16360.2 Steroid DWF4/CYP90B1 low borderline
OBART11G01230.1 Steroid DWF4/CYP90B1 medium borderline
OBART12G01000.3 Steroid DWF4/CYP90B1 medium borderline
OBART12G02050.1 Steroid DWF4/CYP90B1 low borderline
OBART12G05550.1 Steroid DWF4/CYP90B1 low borderline
OBART12G07920.1 Steroid DWF4/CYP90B1 low borderline
OBART12G08870.1 Steroid DWF4/CYP90B1 medium borderline
OBART12G13570.1 Steroid DWF4/CYP90B1 low borderline
OBART12G17050.1 Steroid DWF4/CYP90B1 low borderline
OBART12G17060.1 Steroid DWF4/CYP90B1 low borderline
OBART02G16150.1 Steroid DWF5 medium pass
OBART01G02250.1 Steroid DWF7 medium pass
OBART03G01100.1 Steroid FK high pass
OBART09G19890.1 Steroid FK high pass
OBART01G00270.1 Steroid HYD1 high pass
OBART01G00270.2 Steroid HYD1 high pass
OBART01G00270.3 Steroid HYD1 high pass
OBART01G00270.4 Steroid HYD1 medium pass