PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
OBART08G23380.1 Terpenoid CYP71 medium pass
OBART08G23540.1 Terpenoid CYP71 medium pass
OBART09G03240.1 Terpenoid CYP71 medium borderline
OBART09G17380.1 Terpenoid CYP71 medium borderline
OBART09G17380.2 Terpenoid CYP71 low borderline
OBART09G17860.1 Terpenoid CYP71 medium pass
OBART09G20350.1 Terpenoid CYP71 medium pass
OBART10G02600.1 Terpenoid CYP71 medium pass
OBART10G03850.1 Terpenoid CYP71 medium borderline
OBART10G11340.1 Terpenoid CYP71 low borderline
OBART11G08610.1 Terpenoid CYP71 low borderline
OBART11G08610.2 Terpenoid CYP71 low borderline
OBART11G13110.1 Terpenoid CYP71 medium borderline
OBART12G13570.1 Terpenoid CYP71 medium borderline
OBART12G20240.1 Terpenoid CYP71 low borderline
OBART01G05440.1 Terpenoid CYP76 low borderline
OBART01G07980.1 Terpenoid CYP76 low borderline
OBART01G08010.1 Terpenoid CYP76 low borderline
OBART01G14730.1 Terpenoid CYP76 medium pass
OBART01G19690.1 Terpenoid CYP76 medium pass
OBART01G27770.1 Terpenoid CYP76 medium pass
OBART01G27810.1 Terpenoid CYP76 low borderline
OBART01G35270.1 Terpenoid CYP76 medium pass
OBART02G00700.1 Terpenoid CYP76 low borderline
OBART02G00700.2 Terpenoid CYP76 low borderline
OBART02G00790.1 Terpenoid CYP76 low borderline
OBART02G09090.1 Terpenoid CYP76 low borderline
OBART02G12230.1 Terpenoid CYP76 medium pass
OBART02G12230.2 Terpenoid CYP76 low borderline
OBART02G12230.3 Terpenoid CYP76 low borderline
OBART02G14140.1 Terpenoid CYP76 medium pass
OBART02G16220.1 Terpenoid CYP76 medium pass
OBART02G16230.1 Terpenoid CYP76 medium pass
OBART02G17500.1 Terpenoid CYP76 medium pass
OBART02G17540.1 Terpenoid CYP76 low borderline
OBART02G17540.2 Terpenoid CYP76 low borderline
OBART02G17550.1 Terpenoid CYP76 medium borderline
OBART02G17560.1 Terpenoid CYP76 medium borderline
OBART02G21170.1 Terpenoid CYP76 medium borderline
OBART02G21200.1 Terpenoid CYP76 medium borderline
OBART02G21240.1 Terpenoid CYP76 medium borderline
OBART02G21340.1 Terpenoid CYP76 medium borderline
OBART03G00990.1 Terpenoid CYP76 medium pass
OBART03G02740.1 Terpenoid CYP76 medium pass
OBART03G10580.1 Terpenoid CYP76 medium pass
OBART03G10590.1 Terpenoid CYP76 medium borderline
OBART03G10680.1 Terpenoid CYP76 medium pass
OBART03G15050.1 Terpenoid CYP76 low borderline
OBART03G18460.1 Terpenoid CYP76 medium borderline
OBART03G22840.1 Terpenoid CYP76 medium pass