Oryza glumaepatula (oryza_glumaepatula)
Imported from atlas release summary for Oryza glumaepatula.
2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5201
Family-Level Calls
C4H
6.44%
C3'H/CYP98A
6.08%
BAHD
5.88%
UGT
4.31%
7DLGT
3.98%
UFGT
3.79%
T3O
3.56%
CYP76
3.38%
Other Families
62.58%
More Families (97)
4CL
168
3.23%
IFS
160
3.08%
F3'H/CYP75B
142
2.73%
POD
140
2.69%
NMT
122
2.35%
BR6OX2/CYP85A2
111
2.13%
DWF4/CYP90B1
109
2.1%
STR
100
1.92%
CYP71
91
1.75%
F3H
88
1.69%
CAD
79
1.52%
SMT1/SMT2/SMT3
77
1.48%
CAS
77
1.48%
TPS
74
1.42%
GES
64
1.23%
TRI/TRII
59
1.13%
CODM/T6ODM
55
1.06%
PYKS
55
1.06%
SGD
54
1.04%
G8O/G8H
53
1.02%
IFR
52
1.0%
CCR
52
1.0%
COMT
51
0.98%
FNS
47
0.9%
CSE
47
0.9%
T16H
45
0.87%
SLS
41
0.79%
RAS
41
0.79%
PMT
40
0.77%
ANR
40
0.77%
16OMT
39
0.75%
LAC
38
0.73%
CYP90D1
38
0.73%
GS
37
0.71%
H6H
36
0.69%
F5H/CYP84A
35
0.67%
HCT
34
0.65%
CYP51G1
33
0.63%
CHS
32
0.62%
NCS
31
0.6%
DFR
30
0.58%
PAL
27
0.52%
F3'5'H/CYP75A
26
0.5%
CPD/CYP90A1
26
0.5%
BR6OX1/CYP85A1
25
0.48%
IO
23
0.44%
8HGO
23
0.44%
ANS/LDOX
22
0.42%
7DLH
20
0.38%
COR
20
0.38%
CNMT
18
0.35%
BBE
18
0.35%
XMT_MXMT_DXMT
16
0.31%
LAMT
15
0.29%
FPPS
15
0.29%
TAT
14
0.27%
CPR
14
0.27%
ROT3/CYP90C1
14
0.27%
CYP80B1
11
0.21%
MVK
11
0.21%
GGPPS
10
0.19%
CYP719
9
0.17%
HPPR
9
0.17%
HYD1
9
0.17%
SQS/FDFT1
9
0.17%
MPO
8
0.15%
CCoAOMT
8
0.15%
MVD
8
0.15%
TYDC_DDC
7
0.13%
6OMT_4OMT_SOMT
7
0.13%
AACT
7
0.13%
MCT/IspD
7
0.13%
CYP80F1
6
0.12%
CHI
6
0.12%
ISY
5
0.1%
ADC
5
0.1%
FK
5
0.1%
SMO1/SMO2
5
0.1%
ODC
4
0.08%
DET2
4
0.08%
HMGR
4
0.08%
PMK
4
0.08%
DXS
4
0.08%
TDC
3
0.06%
FLS
3
0.06%
SQE
3
0.06%
DWF1
3
0.06%
IDI
3
0.06%
DWF5
2
0.04%
DXR
2
0.04%
CMK/IspE
2
0.04%
MDS/IspF
2
0.04%
HMGS
2
0.04%
HDR/IspH
2
0.04%
DWF7
1
0.02%
CPI1
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 585 | 19 | BAHD (210) | View species results |
| Alkaloid pathway | 460 | 24 | 7DLGT (86) | View species results |
| Flavonoid pathway | 313 | 13 | UFGT (179) | View species results |
| Phenylpropanoid pathway | 312 | 13 | POD (108) | View species results |
| Rosmarinic acid pathway | 165 | 7 | C4H (86) | View species results |
| Steroid pathway | 136 | 13 | CAS (53) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2030 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 381 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Oglu01G0001560.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0005450.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0005450.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0015910.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0020770.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0020770.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0025710.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0025710.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0025710.3 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0025720.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0025750.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0026170.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0031250.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Oglu01G0033070.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu01G0039830.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu02G0008120.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu02G0008120.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu02G0010020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu02G0013940.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu02G0018950.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu03G0004090.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu03G0004090.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu03G0011350.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Oglu03G0027180.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu03G0027180.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu03G0033640.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Oglu04G0003080.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu04G0003080.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu04G0018940.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu04G0029970.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Oglu04G0030300.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu05G0001430.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu05G0001450.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu05G0007930.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu05G0015330.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu06G0016990.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu06G0019130.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu06G0021340.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu06G0022210.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Oglu06G0022230.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Oglu06G0022250.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Oglu06G0029320.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu07G0005390.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu07G0009360.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu07G0009360.2 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu07G0010300.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu07G0014110.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu07G0016060.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Oglu07G0017080.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Oglu07G0017100.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |