PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Oglu11G0016360.1 Rosmarinic Acid 4CL low borderline
Oglu12G0003250.1 Rosmarinic Acid 4CL low borderline
Oglu12G0003250.2 Rosmarinic Acid 4CL low borderline
Oglu12G0003250.3 Rosmarinic Acid 4CL low borderline
Oglu12G0004910.1 Rosmarinic Acid 4CL medium pass
Oglu12G0004910.2 Rosmarinic Acid 4CL medium pass
Oglu01G0005860.1 Rosmarinic Acid C4H low borderline
Oglu01G0006750.1 Rosmarinic Acid C4H low borderline
Oglu01G0006750.2 Rosmarinic Acid C4H low borderline
Oglu01G0007140.1 Rosmarinic Acid C4H medium pass
Oglu01G0007160.1 Rosmarinic Acid C4H low borderline
Oglu01G0007940.1 Rosmarinic Acid C4H low borderline
Oglu01G0007960.1 Rosmarinic Acid C4H low borderline
Oglu01G0007970.1 Rosmarinic Acid C4H low borderline
Oglu01G0009100.1 Rosmarinic Acid C4H low borderline
Oglu01G0009110.1 Rosmarinic Acid C4H medium pass
Oglu01G0009110.2 Rosmarinic Acid C4H medium pass
Oglu01G0009120.1 Rosmarinic Acid C4H medium pass
Oglu01G0009130.1 Rosmarinic Acid C4H medium pass
Oglu01G0009140.1 Rosmarinic Acid C4H low borderline
Oglu01G0009150.1 Rosmarinic Acid C4H medium pass
Oglu01G0010320.1 Rosmarinic Acid C4H medium pass
Oglu01G0010330.1 Rosmarinic Acid C4H low borderline
Oglu01G0016470.1 Rosmarinic Acid C4H low borderline
Oglu01G0018120.1 Rosmarinic Acid C4H medium pass
Oglu01G0018980.1 Rosmarinic Acid C4H low borderline
Oglu01G0022000.1 Rosmarinic Acid C4H medium pass
Oglu01G0023020.1 Rosmarinic Acid C4H low borderline
Oglu01G0025250.1 Rosmarinic Acid C4H low borderline
Oglu01G0026910.1 Rosmarinic Acid C4H low borderline
Oglu01G0026920.1 Rosmarinic Acid C4H low borderline
Oglu01G0026930.1 Rosmarinic Acid C4H low borderline
Oglu01G0026940.1 Rosmarinic Acid C4H low borderline
Oglu01G0026940.2 Rosmarinic Acid C4H low borderline
Oglu01G0026940.3 Rosmarinic Acid C4H low borderline
Oglu01G0026940.4 Rosmarinic Acid C4H low borderline
Oglu01G0026960.1 Rosmarinic Acid C4H low borderline
Oglu01G0026960.2 Rosmarinic Acid C4H low borderline
Oglu01G0031390.1 Rosmarinic Acid C4H medium pass
Oglu01G0031400.1 Rosmarinic Acid C4H medium pass
Oglu01G0031420.1 Rosmarinic Acid C4H low borderline
Oglu01G0033300.1 Rosmarinic Acid C4H low borderline
Oglu01G0038080.1 Rosmarinic Acid C4H low borderline
Oglu01G0038080.2 Rosmarinic Acid C4H low borderline
Oglu01G0038860.1 Rosmarinic Acid C4H medium pass
Oglu01G0048220.1 Rosmarinic Acid C4H low borderline
Oglu01G0048230.1 Rosmarinic Acid C4H low borderline
Oglu02G0000570.1 Rosmarinic Acid C4H low borderline
Oglu02G0005320.1 Rosmarinic Acid C4H low borderline
Oglu02G0005320.2 Rosmarinic Acid C4H low borderline