PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Oglu02G0006300.1 Rosmarinic Acid C4H low borderline
Oglu02G0006320.1 Rosmarinic Acid C4H medium pass
Oglu02G0006360.1 Rosmarinic Acid C4H low borderline
Oglu02G0006370.1 Rosmarinic Acid C4H medium pass
Oglu02G0006370.2 Rosmarinic Acid C4H medium pass
Oglu02G0006370.3 Rosmarinic Acid C4H low borderline
Oglu02G0006390.1 Rosmarinic Acid C4H low borderline
Oglu02G0006400.1 Rosmarinic Acid C4H low borderline
Oglu02G0006450.1 Rosmarinic Acid C4H medium pass
Oglu02G0006450.2 Rosmarinic Acid C4H medium pass
Oglu02G0007950.1 Rosmarinic Acid C4H low borderline
Oglu02G0008840.1 Rosmarinic Acid C4H low borderline
Oglu02G0009210.1 Rosmarinic Acid C4H low borderline
Oglu02G0011910.1 Rosmarinic Acid C4H low borderline
Oglu02G0014260.1 Rosmarinic Acid C4H low borderline
Oglu02G0016040.1 Rosmarinic Acid C4H medium pass
Oglu02G0016060.1 Rosmarinic Acid C4H low borderline
Oglu02G0016070.1 Rosmarinic Acid C4H medium pass
Oglu02G0017490.1 Rosmarinic Acid C4H low borderline
Oglu02G0017500.1 Rosmarinic Acid C4H medium pass
Oglu02G0017500.2 Rosmarinic Acid C4H medium pass
Oglu02G0017510.1 Rosmarinic Acid C4H low borderline
Oglu02G0017570.1 Rosmarinic Acid C4H low borderline
Oglu02G0017570.2 Rosmarinic Acid C4H low borderline
Oglu02G0017570.3 Rosmarinic Acid C4H low borderline
Oglu02G0017570.4 Rosmarinic Acid C4H low borderline
Oglu02G0017570.5 Rosmarinic Acid C4H low borderline
Oglu02G0017570.6 Rosmarinic Acid C4H low borderline
Oglu02G0017570.7 Rosmarinic Acid C4H low borderline
Oglu02G0019040.1 Rosmarinic Acid C4H medium pass
Oglu02G0019870.1 Rosmarinic Acid C4H low borderline
Oglu02G0021170.1 Rosmarinic Acid C4H medium pass
Oglu02G0021200.1 Rosmarinic Acid C4H medium pass
Oglu02G0021210.1 Rosmarinic Acid C4H medium pass
Oglu02G0021240.1 Rosmarinic Acid C4H low borderline
Oglu02G0021250.1 Rosmarinic Acid C4H low borderline
Oglu02G0021290.1 Rosmarinic Acid C4H low borderline
Oglu02G0023130.1 Rosmarinic Acid C4H low borderline
Oglu02G0023240.1 Rosmarinic Acid C4H low borderline
Oglu02G0023250.1 Rosmarinic Acid C4H medium pass
Oglu02G0029600.1 Rosmarinic Acid C4H low borderline
Oglu03G0000970.1 Rosmarinic Acid C4H medium pass
Oglu03G0002630.1 Rosmarinic Acid C4H medium pass
Oglu03G0003030.1 Rosmarinic Acid C4H low borderline
Oglu03G0004910.1 Rosmarinic Acid C4H low borderline
Oglu03G0009240.1 Rosmarinic Acid C4H low borderline
Oglu03G0010320.1 Rosmarinic Acid C4H low borderline
Oglu03G0010320.2 Rosmarinic Acid C4H low borderline
Oglu03G0010330.1 Rosmarinic Acid C4H medium pass
Oglu03G0010410.1 Rosmarinic Acid C4H medium pass