PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Potra001598g13194.2 Alkaloid COR medium pass
Potra001598g13194.3 Alkaloid COR medium pass
Potra001598g13194.4 Alkaloid COR medium pass
Potra001618g13315.1 Alkaloid COR medium pass
Potra001618g13315.2 Alkaloid COR medium pass
Potra001618g13315.3 Alkaloid COR medium pass
Potra001618g13315.4 Alkaloid COR medium pass
Potra001999g15697.1 Alkaloid COR medium pass
Potra001999g15697.2 Alkaloid COR medium pass
Potra001999g15697.3 Alkaloid COR medium pass
Potra001999g15697.4 Alkaloid COR medium pass
Potra001999g15697.5 Alkaloid COR medium pass
Potra001999g15697.6 Alkaloid COR medium pass
Potra001999g15697.7 Alkaloid COR medium pass
Potra001999g15697.8 Alkaloid COR medium pass
Potra002161g16689.1 Alkaloid COR medium pass
Potra002161g16689.2 Alkaloid COR medium pass
Potra002187g16853.1 Alkaloid COR medium pass
Potra002187g16853.2 Alkaloid COR medium pass
Potra002503g18900.1 Alkaloid COR medium pass
Potra002503g18900.2 Alkaloid COR medium pass
Potra149410g34386.1 Alkaloid COR medium pass
Potra174538g27731.1 Alkaloid COR medium pass
Potra174538g27731.2 Alkaloid COR medium pass
Potra174538g27731.3 Alkaloid COR medium pass
Potra192949g28842.1 Alkaloid COR medium pass
Potra000503g03270.1 Alkaloid CYP719 medium borderline
Potra000520g03516.2 Alkaloid CYP719 low borderline
Potra000726g05683.1 Alkaloid CYP719 medium borderline
Potra000726g05683.2 Alkaloid CYP719 medium borderline
Potra000876g07055.1 Alkaloid CYP719 medium borderline
Potra001324g11373.1 Alkaloid CYP719 medium borderline
Potra002011g15767.1 Alkaloid CYP719 medium borderline
Potra002011g15767.2 Alkaloid CYP719 medium borderline
Potra002011g15767.3 Alkaloid CYP719 medium borderline
Potra002011g15767.5 Alkaloid CYP719 medium borderline
Potra002011g15767.6 Alkaloid CYP719 medium borderline
Potra002203g16962.1 Alkaloid CYP719 medium borderline
Potra002516g18979.1 Alkaloid CYP719 medium borderline
Potra002598g19517.1 Alkaloid CYP719 medium borderline
Potra168341g27363.1 Alkaloid CYP719 medium borderline
Potra000357g01397.1 Alkaloid CYP80B1 medium borderline
Potra000357g01397.2 Alkaloid CYP80B1 low borderline
Potra000662g34587.1 Alkaloid CYP80B1 low borderline
Potra000733g05782.1 Alkaloid CYP80B1 low borderline
Potra001160g10064.1 Alkaloid CYP80B1 medium borderline
Potra001177g10188.1 Alkaloid CYP80B1 low borderline
Potra001177g10188.2 Alkaloid CYP80B1 low borderline
Potra001177g10188.3 Alkaloid CYP80B1 low borderline
Potra005767g25483.1 Alkaloid CYP80B1 medium borderline