PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Potra183734g28329.1 Alkaloid GES medium pass
Potra191870g28772.1 Alkaloid GES low borderline
Potra194171g28933.1 Alkaloid GES medium pass
Potra194171g28933.2 Alkaloid GES medium pass
Potra194171g28933.3 Alkaloid GES medium pass
Potra194171g28933.4 Alkaloid GES medium pass
Potra199210g29383.1 Alkaloid GES medium pass
Potra000381g01695.1 Alkaloid GS low borderline
Potra000381g01695.2 Alkaloid GS low borderline
Potra000381g01695.3 Alkaloid GS low borderline
Potra000381g01695.4 Alkaloid GS low borderline
Potra000381g01695.5 Alkaloid GS low borderline
Potra000381g01695.6 Alkaloid GS low borderline
Potra000381g01695.7 Alkaloid GS low borderline
Potra000381g01695.8 Alkaloid GS low borderline
Potra000521g03521.1 Alkaloid GS low borderline
Potra000521g03521.2 Alkaloid GS low borderline
Potra000521g03521.3 Alkaloid GS low borderline
Potra000521g03521.4 Alkaloid GS low borderline
Potra000521g03521.5 Alkaloid GS low borderline
Potra000579g04333.1 Alkaloid GS low borderline
Potra000625g04761.1 Alkaloid GS high pass
Potra000625g04761.2 Alkaloid GS high pass
Potra000625g04761.3 Alkaloid GS high pass
Potra000625g04761.4 Alkaloid GS high pass
Potra000762g06021.1 Alkaloid GS high pass
Potra000762g06021.2 Alkaloid GS high pass
Potra000762g06021.3 Alkaloid GS high pass
Potra000762g06021.4 Alkaloid GS high pass
Potra000762g06021.5 Alkaloid GS high pass
Potra000762g06021.6 Alkaloid GS high pass
Potra000762g06021.7 Alkaloid GS high pass
Potra000762g06021.8 Alkaloid GS high pass
Potra000779g06140.1 Alkaloid GS low borderline
Potra000779g06140.2 Alkaloid GS low borderline
Potra000779g06140.3 Alkaloid GS low borderline
Potra000779g06140.4 Alkaloid GS low borderline
Potra000779g06140.5 Alkaloid GS low borderline
Potra001024g08553.1 Alkaloid GS high pass
Potra001024g08553.2 Alkaloid GS high pass
Potra001175g10180.1 Alkaloid GS medium pass
Potra001175g10180.2 Alkaloid GS medium pass
Potra001182g10253.1 Alkaloid GS high pass
Potra001307g11231.1 Alkaloid GS low borderline
Potra001748g14249.1 Alkaloid GS high pass
Potra001932g15315.1 Alkaloid GS low borderline
Potra001932g15315.2 Alkaloid GS low borderline
Potra001932g15315.3 Alkaloid GS low borderline
Potra002132g16515.1 Alkaloid GS high pass
Potra002320g17700.1 Alkaloid GS high pass