PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Potra002402g18275.7 Alkaloid 7DLGT low borderline
Potra002493g18834.1 Alkaloid 7DLGT medium pass
Potra002542g19139.1 Alkaloid 7DLGT low borderline
Potra002542g19149.1 Alkaloid 7DLGT medium pass
Potra002542g19150.1 Alkaloid 7DLGT medium pass
Potra002594g19495.1 Alkaloid 7DLGT medium pass
Potra002601g19535.1 Alkaloid 7DLGT medium pass
Potra002827g20071.1 Alkaloid 7DLGT high pass
Potra002827g20071.2 Alkaloid 7DLGT high pass
Potra002827g20071.3 Alkaloid 7DLGT high pass
Potra002827g20071.4 Alkaloid 7DLGT high pass
Potra002827g20071.5 Alkaloid 7DLGT high pass
Potra002827g20073.1 Alkaloid 7DLGT medium pass
Potra002838g20097.1 Alkaloid 7DLGT low borderline
Potra003342g21400.1 Alkaloid 7DLGT medium pass
Potra003342g21400.2 Alkaloid 7DLGT medium pass
Potra003441g21674.1 Alkaloid 7DLGT medium pass
Potra003667g22373.1 Alkaloid 7DLGT medium pass
Potra003667g22373.2 Alkaloid 7DLGT medium pass
Potra003667g22373.3 Alkaloid 7DLGT medium pass
Potra003667g22374.1 Alkaloid 7DLGT medium pass
Potra003667g22374.2 Alkaloid 7DLGT medium pass
Potra003709g22513.1 Alkaloid 7DLGT medium pass
Potra003720g22561.1 Alkaloid 7DLGT medium pass
Potra003720g22561.2 Alkaloid 7DLGT medium pass
Potra003720g22561.3 Alkaloid 7DLGT medium pass
Potra003720g22561.4 Alkaloid 7DLGT medium pass
Potra003774g22799.1 Alkaloid 7DLGT low borderline
Potra003795g22884.1 Alkaloid 7DLGT medium pass
Potra003846g23123.1 Alkaloid 7DLGT low borderline
Potra003856g32406.1 Alkaloid 7DLGT low borderline
Potra003891g23371.1 Alkaloid 7DLGT low borderline
Potra003919g23511.1 Alkaloid 7DLGT low borderline
Potra003919g23512.1 Alkaloid 7DLGT low borderline
Potra003919g23513.1 Alkaloid 7DLGT low borderline
Potra003919g23513.2 Alkaloid 7DLGT low borderline
Potra003994g24046.1 Alkaloid 7DLGT medium pass
Potra004001g24091.1 Alkaloid 7DLGT medium pass
Potra004111g24522.1 Alkaloid 7DLGT high pass
Potra004151g24634.1 Alkaloid 7DLGT medium pass
Potra004294g24783.1 Alkaloid 7DLGT low borderline
Potra004345g24832.1 Alkaloid 7DLGT medium pass
Potra004452g24936.1 Alkaloid 7DLGT medium pass
Potra004614g25118.1 Alkaloid 7DLGT medium pass
Potra004939g25226.1 Alkaloid 7DLGT high pass
Potra004939g25227.1 Alkaloid 7DLGT medium pass
Potra004939g25227.2 Alkaloid 7DLGT medium pass
Potra005292g25346.1 Alkaloid 7DLGT low borderline
Potra005292g25346.2 Alkaloid 7DLGT low borderline
Potra005386g25382.1 Alkaloid 7DLGT low borderline