PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Potra000781g06157.7 Alkaloid 8HGO medium pass
Potra000781g06157.8 Alkaloid 8HGO medium borderline
Potra000781g06157.9 Alkaloid 8HGO medium pass
Potra000845g06814.1 Alkaloid 8HGO medium borderline
Potra001066g09184.1 Alkaloid 8HGO medium borderline
Potra001066g09184.2 Alkaloid 8HGO medium borderline
Potra001097g09556.1 Alkaloid 8HGO medium borderline
Potra001097g09556.2 Alkaloid 8HGO medium borderline
Potra001097g09556.3 Alkaloid 8HGO medium borderline
Potra001097g09556.4 Alkaloid 8HGO medium borderline
Potra001127g09924.1 Alkaloid 8HGO medium borderline
Potra001127g09924.2 Alkaloid 8HGO low borderline
Potra001127g09924.3 Alkaloid 8HGO medium borderline
Potra001127g09924.4 Alkaloid 8HGO medium borderline
Potra001601g13207.3 Alkaloid 8HGO low borderline
Potra001864g14906.1 Alkaloid 8HGO medium borderline
Potra001864g14906.2 Alkaloid 8HGO medium borderline
Potra001864g14906.3 Alkaloid 8HGO medium borderline
Potra001864g14906.4 Alkaloid 8HGO medium borderline
Potra001864g14906.5 Alkaloid 8HGO medium borderline
Potra001952g15417.1 Alkaloid 8HGO medium pass
Potra001952g15417.2 Alkaloid 8HGO medium pass
Potra001952g15417.3 Alkaloid 8HGO medium pass
Potra001952g15417.4 Alkaloid 8HGO medium pass
Potra001952g15417.5 Alkaloid 8HGO medium pass
Potra001952g15417.6 Alkaloid 8HGO medium pass
Potra002311g17634.12 Alkaloid 8HGO low borderline
Potra002311g17634.4 Alkaloid 8HGO low borderline
Potra002735g37049.1 Alkaloid 8HGO low borderline
Potra003612g22169.1 Alkaloid 8HGO medium borderline
Potra003612g22169.2 Alkaloid 8HGO medium pass
Potra003612g22169.3 Alkaloid 8HGO medium borderline
Potra003612g22169.4 Alkaloid 8HGO medium borderline
Potra003612g22169.5 Alkaloid 8HGO medium pass
Potra005252g25335.1 Alkaloid 8HGO medium borderline
Potra005404g25384.1 Alkaloid 8HGO medium borderline
Potra005404g25384.2 Alkaloid 8HGO medium borderline
Potra005404g25384.3 Alkaloid 8HGO medium borderline
Potra007770g35626.1 Alkaloid 8HGO medium borderline
Potra153673g26735.1 Alkaloid 8HGO medium pass
Potra003764g22746.1 Alkaloid ADC medium pass
Potra003764g22746.2 Alkaloid ADC medium pass
Potra000648g04960.1 Alkaloid BBE medium borderline
Potra000656g33135.1 Alkaloid BBE low borderline
Potra000704g05503.1 Alkaloid BBE medium borderline
Potra000715g05604.1 Alkaloid BBE medium borderline
Potra000715g05605.1 Alkaloid BBE medium borderline
Potra000790g06251.1 Alkaloid BBE medium borderline
Potra000790g06252.1 Alkaloid BBE medium borderline
Potra000790g06253.1 Alkaloid BBE medium borderline