PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Potra000551g03970.2 Alkaloid CNMT low borderline
Potra000551g03970.3 Alkaloid CNMT low borderline
Potra000799g06336.1 Alkaloid CNMT low borderline
Potra000799g06336.2 Alkaloid CNMT low borderline
Potra000799g06336.3 Alkaloid CNMT low borderline
Potra000799g06336.4 Alkaloid CNMT low borderline
Potra000799g06336.5 Alkaloid CNMT low borderline
Potra000799g06336.7 Alkaloid CNMT low borderline
Potra000839g06770.1 Alkaloid CNMT low borderline
Potra000839g06770.2 Alkaloid CNMT low borderline
Potra000839g06770.3 Alkaloid CNMT low borderline
Potra000839g06770.4 Alkaloid CNMT low borderline
Potra000909g07372.1 Alkaloid CNMT low borderline
Potra000909g07372.2 Alkaloid CNMT low borderline
Potra001486g12402.1 Alkaloid CNMT low borderline
Potra001486g12402.2 Alkaloid CNMT low borderline
Potra001486g12402.3 Alkaloid CNMT low borderline
Potra001950g15408.1 Alkaloid CNMT low borderline
Potra002412g18355.1 Alkaloid CNMT low borderline
Potra002412g18355.2 Alkaloid CNMT low borderline
Potra002412g18355.3 Alkaloid CNMT low borderline
Potra002412g18355.4 Alkaloid CNMT low borderline
Potra002439g18500.6 Alkaloid CNMT low borderline
Potra002518g19016.1 Alkaloid CNMT low borderline
Potra002518g19016.2 Alkaloid CNMT low borderline
Potra003221g21054.1 Alkaloid CNMT medium borderline
Potra003221g21054.2 Alkaloid CNMT medium borderline
Potra003221g21054.3 Alkaloid CNMT medium borderline
Potra003221g21054.4 Alkaloid CNMT medium borderline
Potra003221g21054.5 Alkaloid CNMT medium borderline
Potra003221g21054.6 Alkaloid CNMT medium borderline
Potra004039g24362.8 Alkaloid CNMT low borderline
Potra000181g00724.3 Alkaloid CODM/T6ODM medium borderline
Potra000181g00725.1 Alkaloid CODM/T6ODM medium borderline
Potra000181g00725.2 Alkaloid CODM/T6ODM medium borderline
Potra000181g00726.1 Alkaloid CODM/T6ODM medium borderline
Potra000194g00840.1 Alkaloid CODM/T6ODM medium borderline
Potra000379g01652.1 Alkaloid CODM/T6ODM medium borderline
Potra000379g01652.2 Alkaloid CODM/T6ODM medium borderline
Potra000379g01652.3 Alkaloid CODM/T6ODM medium borderline
Potra000440g02424.2 Alkaloid CODM/T6ODM medium borderline
Potra000479g02934.1 Alkaloid CODM/T6ODM medium borderline
Potra000479g02934.2 Alkaloid CODM/T6ODM medium borderline
Potra000526g03608.1 Alkaloid CODM/T6ODM medium borderline
Potra000526g03608.2 Alkaloid CODM/T6ODM medium borderline
Potra000526g03608.4 Alkaloid CODM/T6ODM medium borderline
Potra000526g03608.5 Alkaloid CODM/T6ODM medium borderline
Potra000568g04179.1 Alkaloid CODM/T6ODM medium borderline
Potra000628g04791.1 Alkaloid CODM/T6ODM medium borderline
Potra000628g04791.2 Alkaloid CODM/T6ODM medium borderline