PlantSME Plant secondary metabolism enzyme database

Raphanus sativus (raphanus_sativus)

Imported from atlas release summary for Raphanus sativus.

2318
Candidate Protein Records
1922
Pathway-Level Records
4722
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 609 20 BAHD (266) View species results
Phenylpropanoid pathway 426 11 POD (182) View species results
Alkaloid pathway 406 20 7DLGT (73) View species results
Flavonoid pathway 216 12 UFGT (141) View species results
Rosmarinic acid pathway 156 7 C4H (66) View species results
Steroid pathway 109 12 SMT1/SMT2/SMT3 (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1916 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Rsat05G0013710 Flavonoid UFGT high pass
Rsat05G0014540 Flavonoid UFGT medium pass
Rsat05G0015020 Flavonoid UFGT medium pass
Rsat05G0025370 Flavonoid UFGT high pass
Rsat05G0025380 Flavonoid UFGT medium pass
Rsat05G0027320 Flavonoid UFGT medium pass
Rsat05G0027330 Flavonoid UFGT high pass
Rsat05G0027340 Flavonoid UFGT medium pass
Rsat05G0027990 Flavonoid UFGT high pass
Rsat05G0030470 Flavonoid UFGT high pass
Rsat05G0031080 Flavonoid UFGT medium pass
Rsat05G0034540 Flavonoid UFGT high pass
Rsat05G0041780 Flavonoid UFGT high pass
Rsat05G0042170 Flavonoid UFGT high pass
Rsat05G0042200 Flavonoid UFGT medium pass
Rsat05G0042210 Flavonoid UFGT medium pass
Rsat05G0042340 Flavonoid UFGT medium pass
Rsat05G0046490 Flavonoid UFGT high pass
Rsat05G0048830 Flavonoid UFGT medium pass
Rsat05G0050490 Flavonoid UFGT medium pass
Rsat05G0050680 Flavonoid UFGT high pass
Rsat05G0057100 Flavonoid UFGT medium pass
Rsat06G0003050 Flavonoid UFGT medium pass
Rsat06G0003070 Flavonoid UFGT medium pass
Rsat06G0016730 Flavonoid UFGT medium pass
Rsat06G0016750 Flavonoid UFGT high pass
Rsat06G0016760 Flavonoid UFGT medium pass
Rsat06G0016770 Flavonoid UFGT low borderline
Rsat06G0026830 Flavonoid UFGT medium pass
Rsat06G0026840 Flavonoid UFGT medium pass
Rsat06G0027990 Flavonoid UFGT medium pass
Rsat07G0005450 Flavonoid UFGT high pass
Rsat07G0011990 Flavonoid UFGT high pass
Rsat07G0019770 Flavonoid UFGT high pass
Rsat07G0022250 Flavonoid UFGT medium pass
Rsat07G0022260 Flavonoid UFGT medium pass
Rsat07G0022270 Flavonoid UFGT medium pass
Rsat07G0022280 Flavonoid UFGT medium pass
Rsat07G0023630 Flavonoid UFGT high pass
Rsat08G0008250 Flavonoid UFGT medium pass
Rsat08G0010850 Flavonoid UFGT medium pass
Rsat08G0014460 Flavonoid UFGT high pass
Rsat08G0014470 Flavonoid UFGT medium pass
Rsat08G0024110 Flavonoid UFGT medium pass
Rsat08G0029100 Flavonoid UFGT medium pass
Rsat08G0031360 Flavonoid UFGT medium pass
Rsat09G0000430 Flavonoid UFGT high pass
Rsat09G0016200 Flavonoid UFGT medium pass
Rsat09G0019430 Flavonoid UFGT medium pass
Rsat09G0020890 Flavonoid UFGT low borderline