PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Protein/Isoform Record Pathway Family Confidence Status
MCH79542.1[Trifolium Alkaloid 7DLGT medium pass
MCH79543.1[Trifolium Alkaloid 7DLGT medium pass
MCH80229.1[Trifolium Alkaloid 7DLGT medium pass
MCH80351.1[Trifolium Alkaloid 7DLGT medium pass
MCH81192.1[Trifolium Alkaloid 7DLGT low borderline
MCH83203.1[Trifolium Alkaloid 7DLGT low borderline
MCH84404.1[Trifolium Alkaloid 7DLGT low borderline
MCH84608.1[Trifolium Alkaloid 7DLGT low borderline
MCH84679.1[Trifolium Alkaloid 7DLGT low borderline
MCH85094.1[Trifolium Alkaloid 7DLGT medium pass
MCH86595.1[Trifolium Alkaloid 7DLGT low borderline
MCH87849.1[Trifolium Alkaloid 7DLGT low borderline
MCH89973.1[Trifolium Alkaloid 7DLGT low borderline
MCH90318.1[Trifolium Alkaloid 7DLGT low borderline
MCH90506.1[Trifolium Alkaloid 7DLGT low borderline
MCH91358.1[Trifolium Alkaloid 7DLGT medium pass
MCH91722.1[Trifolium Alkaloid 7DLGT medium pass
MCH92065.1[Trifolium Alkaloid 7DLGT high pass
MCH93586.1[Trifolium Alkaloid 7DLGT low borderline
MCH94055.1[Trifolium Alkaloid 7DLGT low borderline
MCH94057.1[Trifolium Alkaloid 7DLGT medium pass
MCH94264.1[Trifolium Alkaloid 7DLGT low borderline
MCH95689.1[Trifolium Alkaloid 7DLGT low borderline
MCH96837.1[Trifolium Alkaloid 7DLGT medium pass
MCH98380.1[Trifolium Alkaloid 7DLGT low borderline
MCH98709.1[Trifolium Alkaloid 7DLGT medium pass
MCH99369.1[Trifolium Alkaloid 7DLGT low borderline
MCH99550.1[Trifolium Alkaloid 7DLGT medium pass
MCH99595.1[Trifolium Alkaloid 7DLGT medium pass
MCH99644.1[Trifolium Alkaloid 7DLGT low borderline
MCI00653.1[Trifolium Alkaloid 7DLGT medium pass
MCI04197.1[Trifolium Alkaloid 7DLGT low borderline
MCI05480.1[Trifolium Alkaloid 7DLGT low borderline
MCI06728.1[Trifolium Alkaloid 7DLGT high pass
MCI06894.1[Trifolium Alkaloid 7DLGT low borderline
MCI06977.1[Trifolium Alkaloid 7DLGT low borderline
MCI07677.1[Trifolium Alkaloid 7DLGT low borderline
MCI07940.1[Trifolium Alkaloid 7DLGT high pass
MCI07970.1[Trifolium Alkaloid 7DLGT high pass
MCI08360.1[Trifolium Alkaloid 7DLGT high pass
MCI08871.1[Trifolium Alkaloid 7DLGT low borderline
MCI10324.1[Trifolium Alkaloid 7DLGT medium pass
MCI12181.1[Trifolium Alkaloid 7DLGT medium pass
MCI12366.1[Trifolium Alkaloid 7DLGT low borderline
MCI13029.1[Trifolium Alkaloid 7DLGT medium pass
MCI13131.1[Trifolium Alkaloid 7DLGT medium pass
MCI13328.1[Trifolium Alkaloid 7DLGT medium pass
MCI14671.1[Trifolium Alkaloid 7DLGT medium pass
MCI15219.1[Trifolium Alkaloid 7DLGT low borderline
MCI15625.1[Trifolium Alkaloid 7DLGT high pass