PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status
MCI13492.1[Trifolium Terpenoid BAHD medium pass
MCI13712.1[Trifolium Terpenoid BAHD medium pass
MCI14122.1[Trifolium Terpenoid BAHD medium pass
MCI14288.1[Trifolium Terpenoid BAHD medium pass
MCI14350.1[Trifolium Terpenoid BAHD low borderline
MCI14856.1[Trifolium Terpenoid BAHD medium pass
MCI15329.1[Trifolium Terpenoid BAHD medium pass
MCI15653.1[Trifolium Terpenoid BAHD medium pass
MCI16577.1[Trifolium Terpenoid BAHD medium pass
MCI16661.1[Trifolium Terpenoid BAHD medium pass
MCI17259.1[Trifolium Terpenoid BAHD medium pass
MCI17491.1[Trifolium Terpenoid BAHD medium pass
MCI17790.1[Trifolium Terpenoid BAHD medium pass
MCI18132.1[Trifolium Terpenoid BAHD medium pass
MCI18142.1[Trifolium Terpenoid BAHD medium pass
MCI18452.1[Trifolium Terpenoid BAHD medium pass
MCI19510.1[Trifolium Terpenoid BAHD medium pass
MCI19922.1[Trifolium Terpenoid BAHD medium pass
MCI20521.1[Trifolium Terpenoid BAHD medium pass
MCI21229.1[Trifolium Terpenoid BAHD low borderline
MCI21509.1[Trifolium Terpenoid BAHD medium pass
MCI21671.1[Trifolium Terpenoid BAHD medium pass
MCI22054.1[Trifolium Terpenoid BAHD medium pass
MCI22118.1[Trifolium Terpenoid BAHD medium pass
MCI22357.1[Trifolium Terpenoid BAHD medium pass
MCI22588.1[Trifolium Terpenoid BAHD medium pass
MCI22791.1[Trifolium Terpenoid BAHD medium pass
MCI23017.1[Trifolium Terpenoid BAHD medium pass
MCI23249.1[Trifolium Terpenoid BAHD medium pass
MCI23949.1[Trifolium Terpenoid BAHD medium pass
MCI24257.1[Trifolium Terpenoid BAHD medium pass
MCI24474.1[Trifolium Terpenoid BAHD medium pass
MCI25643.1[Trifolium Terpenoid BAHD medium borderline
MCI26585.1[Trifolium Terpenoid BAHD medium pass
MCI27411.1[Trifolium Terpenoid BAHD medium pass
MCI28082.1[Trifolium Terpenoid BAHD medium pass
MCI28252.1[Trifolium Terpenoid BAHD medium pass
MCI28615.1[Trifolium Terpenoid BAHD low borderline
MCI29386.1[Trifolium Terpenoid BAHD medium pass
MCI29660.1[Trifolium Terpenoid BAHD medium pass
MCI30506.1[Trifolium Terpenoid BAHD medium pass
MCI30777.1[Trifolium Terpenoid BAHD medium pass
MCI30831.1[Trifolium Terpenoid BAHD medium pass
MCI31395.1[Trifolium Terpenoid BAHD medium pass
MCI31491.1[Trifolium Terpenoid BAHD medium pass
MCI32517.1[Trifolium Terpenoid BAHD medium pass
MCI32579.1[Trifolium Terpenoid BAHD medium pass
MCI33033.1[Trifolium Terpenoid BAHD medium pass
MCI34427.1[Trifolium Terpenoid BAHD medium pass
MCI36562.1[Trifolium Terpenoid BAHD medium pass