PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
MCI16033.1[Trifolium Flavonoid IFS low borderline
MCI16849.1[Trifolium Flavonoid IFS medium borderline
MCI16927.1[Trifolium Flavonoid IFS low borderline
MCI17375.1[Trifolium Flavonoid IFS low borderline
MCI17646.1[Trifolium Flavonoid IFS medium borderline
MCI18089.1[Trifolium Flavonoid IFS low borderline
MCI18097.1[Trifolium Flavonoid IFS low borderline
MCI18281.1[Trifolium Flavonoid IFS low borderline
MCI18498.1[Trifolium Flavonoid IFS low borderline
MCI19301.1[Trifolium Flavonoid IFS low borderline
MCI19757.1[Trifolium Flavonoid IFS low borderline
MCI21117.1[Trifolium Flavonoid IFS low borderline
MCI22328.1[Trifolium Flavonoid IFS medium borderline
MCI22833.1[Trifolium Flavonoid IFS low borderline
MCI23005.1[Trifolium Flavonoid IFS medium borderline
MCI23209.1[Trifolium Flavonoid IFS medium borderline
MCI24403.1[Trifolium Flavonoid IFS medium borderline
MCI24634.1[Trifolium Flavonoid IFS low borderline
MCI25835.1[Trifolium Flavonoid IFS medium borderline
MCI26174.1[Trifolium Flavonoid IFS medium borderline
MCI26199.1[Trifolium Flavonoid IFS low borderline
MCI27510.1[Trifolium Flavonoid IFS low borderline
MCI27549.1[Trifolium Flavonoid IFS low borderline
MCI29357.1[Trifolium Flavonoid IFS medium borderline
MCI29991.1[Trifolium Flavonoid IFS low borderline
MCI30067.1[Trifolium Flavonoid IFS low borderline
MCI31313.1[Trifolium Flavonoid IFS medium borderline
MCI31819.1[Trifolium Flavonoid IFS low borderline
MCI32211.1[Trifolium Flavonoid IFS medium borderline
MCI33019.1[Trifolium Flavonoid IFS medium borderline
MCI33063.1[Trifolium Flavonoid IFS low borderline
MCI33739.1[Trifolium Flavonoid IFS low borderline
MCI34127.1[Trifolium Flavonoid IFS medium borderline
MCI34692.1[Trifolium Flavonoid IFS medium borderline
MCI36247.1[Trifolium Flavonoid IFS medium borderline
MCI36636.1[Trifolium Flavonoid IFS medium borderline
MCI37579.1[Trifolium Flavonoid IFS low borderline
MCI40882.1[Trifolium Flavonoid IFS low borderline
MCI41438.1[Trifolium Flavonoid IFS low borderline
MCI43793.1[Trifolium Flavonoid IFS low borderline
MCI44011.1[Trifolium Flavonoid IFS low borderline
MCI46382.1[Trifolium Flavonoid IFS medium borderline
MCI46730.1[Trifolium Flavonoid IFS medium borderline
MCI47105.1[Trifolium Flavonoid IFS medium borderline
MCI53444.1[Trifolium Flavonoid IFS medium borderline
MCI57189.1[Trifolium Flavonoid IFS medium borderline
MCI57977.1[Trifolium Flavonoid IFS low borderline
MCI58701.1[Trifolium Flavonoid IFS medium borderline
MCI62798.1[Trifolium Flavonoid IFS low borderline
MCI65251.1[Trifolium Flavonoid IFS medium borderline