PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
MCH86172.1[Trifolium Flavonoid PAL high pass
MCH89673.1[Trifolium Flavonoid PAL high pass
MCH91974.1[Trifolium Flavonoid PAL medium pass
MCH92301.1[Trifolium Flavonoid PAL medium pass
MCI02221.1[Trifolium Flavonoid PAL high pass
MCI05788.1[Trifolium Flavonoid PAL medium pass
MCI07144.1[Trifolium Flavonoid PAL medium pass
MCI08361.1[Trifolium Flavonoid PAL low borderline
MCI17966.1[Trifolium Flavonoid PAL medium pass
MCI18500.1[Trifolium Flavonoid PAL medium pass
MCI27357.1[Trifolium Flavonoid PAL high pass
MCI27847.1[Trifolium Flavonoid PAL medium pass
MCI27884.1[Trifolium Flavonoid PAL medium pass
MCI28210.1[Trifolium Flavonoid PAL medium pass
MCI32105.1[Trifolium Flavonoid PAL low borderline
MCI41785.1[Trifolium Flavonoid PAL medium pass
MCI43780.1[Trifolium Flavonoid PAL medium pass
MCI58134.1[Trifolium Flavonoid PAL medium pass
MCI69811.1[Trifolium Flavonoid PAL medium pass
MCI87125.1[Trifolium Flavonoid PAL medium pass
MCI88840.1[Trifolium Flavonoid PAL medium pass
MCH86172.1[Trifolium Phenylpropanoid PAL high pass
MCH89673.1[Trifolium Phenylpropanoid PAL high pass
MCH91974.1[Trifolium Phenylpropanoid PAL medium pass
MCH92301.1[Trifolium Phenylpropanoid PAL medium pass
MCI02221.1[Trifolium Phenylpropanoid PAL high pass
MCI05788.1[Trifolium Phenylpropanoid PAL medium pass
MCI07144.1[Trifolium Phenylpropanoid PAL medium pass
MCI08361.1[Trifolium Phenylpropanoid PAL low borderline
MCI17966.1[Trifolium Phenylpropanoid PAL medium pass
MCI18500.1[Trifolium Phenylpropanoid PAL medium pass
MCI27357.1[Trifolium Phenylpropanoid PAL high pass
MCI27847.1[Trifolium Phenylpropanoid PAL medium pass
MCI27884.1[Trifolium Phenylpropanoid PAL medium pass
MCI28210.1[Trifolium Phenylpropanoid PAL medium pass
MCI32105.1[Trifolium Phenylpropanoid PAL low borderline
MCI41785.1[Trifolium Phenylpropanoid PAL medium pass
MCI43780.1[Trifolium Phenylpropanoid PAL medium pass
MCI58134.1[Trifolium Phenylpropanoid PAL medium pass
MCI69811.1[Trifolium Phenylpropanoid PAL medium pass
MCI87125.1[Trifolium Phenylpropanoid PAL medium pass
MCI88840.1[Trifolium Phenylpropanoid PAL medium pass
MCH86172.1[Trifolium Rosmarinic Acid PAL high pass
MCH89673.1[Trifolium Rosmarinic Acid PAL high pass
MCH91974.1[Trifolium Rosmarinic Acid PAL medium pass
MCH92301.1[Trifolium Rosmarinic Acid PAL medium pass
MCI02221.1[Trifolium Rosmarinic Acid PAL high pass
MCI05788.1[Trifolium Rosmarinic Acid PAL medium pass
MCI07144.1[Trifolium Rosmarinic Acid PAL medium pass
MCI08361.1[Trifolium Rosmarinic Acid PAL low borderline