PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
MCH79542.1[Trifolium Flavonoid UFGT low borderline
MCH80229.1[Trifolium Flavonoid UFGT high pass
MCH80351.1[Trifolium Flavonoid UFGT low borderline
MCH81192.1[Trifolium Flavonoid UFGT high pass
MCH84404.1[Trifolium Flavonoid UFGT medium pass
MCH84608.1[Trifolium Flavonoid UFGT high pass
MCH84679.1[Trifolium Flavonoid UFGT medium pass
MCH85094.1[Trifolium Flavonoid UFGT high pass
MCH86595.1[Trifolium Flavonoid UFGT medium pass
MCH87849.1[Trifolium Flavonoid UFGT high pass
MCH90318.1[Trifolium Flavonoid UFGT low borderline
MCH90506.1[Trifolium Flavonoid UFGT medium pass
MCH91358.1[Trifolium Flavonoid UFGT high pass
MCH91722.1[Trifolium Flavonoid UFGT high pass
MCH91827.1[Trifolium Flavonoid UFGT low borderline
MCH92065.1[Trifolium Flavonoid UFGT high pass
MCH92554.1[Trifolium Flavonoid UFGT medium pass
MCH93585.1[Trifolium Flavonoid UFGT medium pass
MCH93586.1[Trifolium Flavonoid UFGT high pass
MCH94057.1[Trifolium Flavonoid UFGT high pass
MCH95689.1[Trifolium Flavonoid UFGT high pass
MCH96837.1[Trifolium Flavonoid UFGT high pass
MCH98380.1[Trifolium Flavonoid UFGT low borderline
MCH98709.1[Trifolium Flavonoid UFGT high pass
MCH99171.1[Trifolium Flavonoid UFGT low borderline
MCH99369.1[Trifolium Flavonoid UFGT low borderline
MCH99550.1[Trifolium Flavonoid UFGT high pass
MCH99595.1[Trifolium Flavonoid UFGT high pass
MCH99644.1[Trifolium Flavonoid UFGT high pass
MCI00653.1[Trifolium Flavonoid UFGT high pass
MCI04197.1[Trifolium Flavonoid UFGT low borderline
MCI05480.1[Trifolium Flavonoid UFGT medium pass
MCI05771.1[Trifolium Flavonoid UFGT low borderline
MCI06728.1[Trifolium Flavonoid UFGT high pass
MCI06894.1[Trifolium Flavonoid UFGT high pass
MCI07940.1[Trifolium Flavonoid UFGT low borderline
MCI07970.1[Trifolium Flavonoid UFGT low borderline
MCI08360.1[Trifolium Flavonoid UFGT high pass
MCI10324.1[Trifolium Flavonoid UFGT high pass
MCI12181.1[Trifolium Flavonoid UFGT medium pass
MCI12366.1[Trifolium Flavonoid UFGT low borderline
MCI13029.1[Trifolium Flavonoid UFGT high pass
MCI13131.1[Trifolium Flavonoid UFGT medium pass
MCI13328.1[Trifolium Flavonoid UFGT high pass
MCI14223.1[Trifolium Flavonoid UFGT medium pass
MCI14671.1[Trifolium Flavonoid UFGT high pass
MCI15219.1[Trifolium Flavonoid UFGT medium pass
MCI15625.1[Trifolium Flavonoid UFGT high pass
MCI16031.1[Trifolium Flavonoid UFGT low borderline
MCI18508.1[Trifolium Flavonoid UFGT medium pass