PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCI37579.1[Trifolium Flavonoid IFS low borderline
MCI40882.1[Trifolium Flavonoid IFS low borderline
MCI41438.1[Trifolium Flavonoid IFS low borderline
MCI43793.1[Trifolium Flavonoid IFS low borderline
MCI44011.1[Trifolium Flavonoid IFS low borderline
MCI46382.1[Trifolium Flavonoid IFS medium borderline
MCI46730.1[Trifolium Flavonoid IFS medium borderline
MCI47105.1[Trifolium Flavonoid IFS medium borderline
MCI53444.1[Trifolium Flavonoid IFS medium borderline
MCI57189.1[Trifolium Flavonoid IFS medium borderline
MCI57977.1[Trifolium Flavonoid IFS low borderline
MCI58701.1[Trifolium Flavonoid IFS medium borderline
MCI62798.1[Trifolium Flavonoid IFS low borderline
MCI65251.1[Trifolium Flavonoid IFS medium borderline
MCI68112.1[Trifolium Flavonoid IFS low borderline
MCI72952.1[Trifolium Flavonoid IFS low borderline
MCI73280.1[Trifolium Flavonoid IFS medium borderline
MCI88312.1[Trifolium Flavonoid IFS medium borderline
MCI90378.1[Trifolium Flavonoid IFS medium borderline
MCI95474.1[Trifolium Flavonoid IFS low borderline
MCI97498.1[Trifolium Flavonoid IFS low borderline
MCH86172.1[Trifolium Flavonoid PAL high pass
MCH89673.1[Trifolium Flavonoid PAL high pass
MCH91974.1[Trifolium Flavonoid PAL medium pass
MCH92301.1[Trifolium Flavonoid PAL medium pass
MCI02221.1[Trifolium Flavonoid PAL high pass
MCI05788.1[Trifolium Flavonoid PAL medium pass
MCI07144.1[Trifolium Flavonoid PAL medium pass
MCI08361.1[Trifolium Flavonoid PAL low borderline
MCI17966.1[Trifolium Flavonoid PAL medium pass
MCI18500.1[Trifolium Flavonoid PAL medium pass
MCI27357.1[Trifolium Flavonoid PAL high pass
MCI27847.1[Trifolium Flavonoid PAL medium pass
MCI27884.1[Trifolium Flavonoid PAL medium pass
MCI28210.1[Trifolium Flavonoid PAL medium pass
MCI32105.1[Trifolium Flavonoid PAL low borderline
MCI41785.1[Trifolium Flavonoid PAL medium pass
MCI43780.1[Trifolium Flavonoid PAL medium pass
MCI58134.1[Trifolium Flavonoid PAL medium pass
MCI69811.1[Trifolium Flavonoid PAL medium pass
MCI87125.1[Trifolium Flavonoid PAL medium pass
MCI88840.1[Trifolium Flavonoid PAL medium pass
MCH79542.1[Trifolium Flavonoid UFGT low borderline
MCH80229.1[Trifolium Flavonoid UFGT high pass
MCH80351.1[Trifolium Flavonoid UFGT low borderline
MCH81192.1[Trifolium Flavonoid UFGT high pass
MCH84404.1[Trifolium Flavonoid UFGT medium pass
MCH84608.1[Trifolium Flavonoid UFGT high pass
MCH84679.1[Trifolium Flavonoid UFGT medium pass
MCH85094.1[Trifolium Flavonoid UFGT high pass