PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCI25896.1[Trifolium Flavonoid UFGT high pass
MCI26513.1[Trifolium Flavonoid UFGT low borderline
MCI27484.1[Trifolium Flavonoid UFGT high pass
MCI29418.1[Trifolium Flavonoid UFGT medium pass
MCI30967.1[Trifolium Flavonoid UFGT low borderline
MCI31759.1[Trifolium Flavonoid UFGT low borderline
MCI32051.1[Trifolium Flavonoid UFGT high pass
MCI34649.1[Trifolium Flavonoid UFGT low borderline
MCI38252.1[Trifolium Flavonoid UFGT low borderline
MCI39286.1[Trifolium Flavonoid UFGT low borderline
MCI41131.1[Trifolium Flavonoid UFGT low borderline
MCI60284.1[Trifolium Flavonoid UFGT low borderline
MCI68776.1[Trifolium Flavonoid UFGT high pass
MCI68874.1[Trifolium Flavonoid UFGT medium pass
MCI69610.1[Trifolium Flavonoid UFGT low borderline
MCI69830.1[Trifolium Flavonoid UFGT low borderline
MCI74721.1[Trifolium Flavonoid UFGT low borderline
MCI75236.1[Trifolium Flavonoid UFGT high pass
MCI76607.1[Trifolium Flavonoid UFGT high pass
MCI83822.1[Trifolium Flavonoid UFGT low borderline
MCI84501.1[Trifolium Flavonoid UFGT high pass
MCI89918.1[Trifolium Flavonoid UFGT low borderline