PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCH97491.1[Trifolium Alkaloid PYKS low borderline
MCI01874.1[Trifolium Alkaloid PYKS high pass
MCI06315.1[Trifolium Alkaloid PYKS high pass
MCI06325.1[Trifolium Alkaloid PYKS medium pass
MCI14552.1[Trifolium Alkaloid PYKS medium pass
MCI15011.1[Trifolium Alkaloid PYKS low borderline
MCI16881.1[Trifolium Alkaloid PYKS medium pass
MCI28497.1[Trifolium Alkaloid PYKS medium pass
MCI30702.1[Trifolium Alkaloid PYKS medium pass
MCI44078.1[Trifolium Alkaloid PYKS medium pass
MCI45608.1[Trifolium Alkaloid PYKS high pass
MCI46366.1[Trifolium Alkaloid PYKS high pass
MCI51194.1[Trifolium Alkaloid PYKS medium pass
MCI58717.1[Trifolium Alkaloid PYKS medium pass
MCI72933.1[Trifolium Alkaloid PYKS medium pass
MCI73828.1[Trifolium Alkaloid PYKS medium pass
MCI74479.1[Trifolium Alkaloid PYKS medium pass
MCI77583.1[Trifolium Alkaloid PYKS medium pass
MCH81160.1[Trifolium Alkaloid SGD medium pass
MCH85979.1[Trifolium Alkaloid SGD medium pass
MCH87566.1[Trifolium Alkaloid SGD medium pass
MCH88102.1[Trifolium Alkaloid SGD medium pass
MCH90762.1[Trifolium Alkaloid SGD medium pass
MCH93135.1[Trifolium Alkaloid SGD medium pass
MCH93151.1[Trifolium Alkaloid SGD medium pass
MCH94187.1[Trifolium Alkaloid SGD medium pass
MCH95293.1[Trifolium Alkaloid SGD medium pass
MCH95304.1[Trifolium Alkaloid SGD medium pass
MCH95956.1[Trifolium Alkaloid SGD medium pass
MCH97615.1[Trifolium Alkaloid SGD medium pass
MCH98811.1[Trifolium Alkaloid SGD low borderline
MCH98953.1[Trifolium Alkaloid SGD medium pass
MCI01144.1[Trifolium Alkaloid SGD medium pass
MCI02701.1[Trifolium Alkaloid SGD medium pass
MCI04362.1[Trifolium Alkaloid SGD medium pass
MCI04609.1[Trifolium Alkaloid SGD medium pass
MCI06427.1[Trifolium Alkaloid SGD medium pass
MCI09062.1[Trifolium Alkaloid SGD medium pass
MCI11557.1[Trifolium Alkaloid SGD medium pass
MCI14151.1[Trifolium Alkaloid SGD medium pass
MCI16952.1[Trifolium Alkaloid SGD medium pass
MCI18290.1[Trifolium Alkaloid SGD low borderline
MCI27829.1[Trifolium Alkaloid SGD low borderline
MCI29035.1[Trifolium Alkaloid SGD medium pass
MCI44163.1[Trifolium Alkaloid SGD low borderline
MCI94054.1[Trifolium Alkaloid SGD low borderline
MCH85710.1[Trifolium Alkaloid SLS medium borderline
MCH98173.1[Trifolium Alkaloid SLS medium borderline
MCI03997.1[Trifolium Alkaloid SLS medium borderline
MCI18476.1[Trifolium Alkaloid SLS low borderline