PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
MCH99595.1[Trifolium Alkaloid 7DLGT medium pass
MCH99644.1[Trifolium Alkaloid 7DLGT low borderline
MCI00653.1[Trifolium Alkaloid 7DLGT medium pass
MCI04197.1[Trifolium Alkaloid 7DLGT low borderline
MCI05480.1[Trifolium Alkaloid 7DLGT low borderline
MCI06728.1[Trifolium Alkaloid 7DLGT high pass
MCI06894.1[Trifolium Alkaloid 7DLGT low borderline
MCI06977.1[Trifolium Alkaloid 7DLGT low borderline
MCI07677.1[Trifolium Alkaloid 7DLGT low borderline
MCI07940.1[Trifolium Alkaloid 7DLGT high pass
MCI07970.1[Trifolium Alkaloid 7DLGT high pass
MCI08360.1[Trifolium Alkaloid 7DLGT high pass
MCI08871.1[Trifolium Alkaloid 7DLGT low borderline
MCI10324.1[Trifolium Alkaloid 7DLGT medium pass
MCI12181.1[Trifolium Alkaloid 7DLGT medium pass
MCI12366.1[Trifolium Alkaloid 7DLGT low borderline
MCI13029.1[Trifolium Alkaloid 7DLGT medium pass
MCI13131.1[Trifolium Alkaloid 7DLGT medium pass
MCI13328.1[Trifolium Alkaloid 7DLGT medium pass
MCI14671.1[Trifolium Alkaloid 7DLGT medium pass
MCI15219.1[Trifolium Alkaloid 7DLGT low borderline
MCI15625.1[Trifolium Alkaloid 7DLGT high pass
MCI16031.1[Trifolium Alkaloid 7DLGT low borderline
MCI18508.1[Trifolium Alkaloid 7DLGT high pass
MCI19885.1[Trifolium Alkaloid 7DLGT low borderline
MCI20206.1[Trifolium Alkaloid 7DLGT low borderline
MCI20354.1[Trifolium Alkaloid 7DLGT medium pass
MCI21560.1[Trifolium Alkaloid 7DLGT low borderline
MCI21577.1[Trifolium Alkaloid 7DLGT low borderline
MCI22323.1[Trifolium Alkaloid 7DLGT medium pass
MCI22366.1[Trifolium Alkaloid 7DLGT low borderline
MCI22411.1[Trifolium Alkaloid 7DLGT medium pass
MCI23692.1[Trifolium Alkaloid 7DLGT medium pass
MCI23784.1[Trifolium Alkaloid 7DLGT low borderline
MCI24492.1[Trifolium Alkaloid 7DLGT low borderline
MCI25152.1[Trifolium Alkaloid 7DLGT medium pass
MCI25896.1[Trifolium Alkaloid 7DLGT medium pass
MCI26513.1[Trifolium Alkaloid 7DLGT medium pass
MCI27484.1[Trifolium Alkaloid 7DLGT medium pass
MCI27616.1[Trifolium Alkaloid 7DLGT low borderline
MCI29418.1[Trifolium Alkaloid 7DLGT medium pass
MCI30179.1[Trifolium Alkaloid 7DLGT low borderline
MCI30967.1[Trifolium Alkaloid 7DLGT low borderline
MCI30973.1[Trifolium Alkaloid 7DLGT low borderline
MCI31194.1[Trifolium Alkaloid 7DLGT low borderline
MCI31759.1[Trifolium Alkaloid 7DLGT low borderline
MCI31833.1[Trifolium Alkaloid 7DLGT low borderline
MCI32051.1[Trifolium Alkaloid 7DLGT medium pass
MCI32464.1[Trifolium Alkaloid 7DLGT low borderline
MCI32586.1[Trifolium Alkaloid 7DLGT medium pass